Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02198 ATGGATGTTGCACCAATGAAGGTTTATAATAGCCATGTAGTACTATTAGTTTCAATTGTTTTTGCTCATGCCATGGCTTTTGCTTCATCAGCTCCCCCAATGGACTTCTCAACTGCTTTTCTCATTAGAGTAGATCAGTCAGGTAATGGTGATTTCAAGAAGATACAAGATGCTATAGACGCCGTTCCATCCAATAACTCAGAACTGGTCTTTATTTGGGTTAAACCAGGAACATACAGAGAAAAGATAGTTGTACCAGCTGATAAACCTTTCATCACACTGAGTGGAACTTTGGCTTCCAACACAATAATCACATGGAATGAAACTGGAGACATATTCGATTCCCCTACACTATCTGTCCTGGCATCCGATTTCGTGGGGCGATACATTACAATAGAGAATACGTATGGGAAAAATGGTAGGGCAGTTGCCCTGAGGGTTTCAGGGAATAAAGCTGCATTCTATGCTTGTAGGATTATTTCCTACCAAGACACTTTGTTGGATGATGCTGGTAGACATTACTATAGCAATTGCTATATCGAAGGTGCTACTGATTTCATATGTGGAGGTGCTGCTTCTTTCTTTGAAAAGTGCCATCTTCACTCAACTTCTGAAGGTAATGGTGCAATTACTGCTCAGTCCAGGGGAGCACCAACTGAGAACACTGGCTTTACATTTCTAAGATGCAAAATCACTGGTATAGGTCCAGCTACACTTGGAAGGCCATGGGGGGTTTACTCTAGAGTAATTTTTGCCTTTACCTACATGTCTAGTGTCATAGCACCACAAGGCTGGAATGACTGGGGAGACCGAAGCAAGCACAGTACTGTATACTATGGAGAGTTCAAATGCTACGGTCCTGGTGCGAATAGAGAAAAGAGGGTGAAATGGTCACTTGGATTATCAGACACTGAAGCTGAACCCTTCTTGAGTAAGAACATGATTGGAGGCAGAGGCTGGCTTAGATCCCCACCAACTCACTTCAAGCGAGGCTCAATGAATATTACAATTAAGGCTAGTCGAAACAAGCTAGGCGAAGACGAGAATGATTTCTCTGATGCTATTGATGAGTTTCAGCTACAAGACCACTACATAGGAGGAATTGCTCTGGGAGAGACGTGTGCTTTGTATCAGATGATTCAAACTCTGGTTTGGGTTGGAAGCGATGTCTGTATTGTTGGATATGGATATGTAAAGTTATGTTATGCAGCAGAAAACACTGGTACAGACTAG 1233 0.4242 MDVAPMKVYNSHVVLLVSIVFAHAMAFASSAPPMDFSTAFLIRVDQSGNGDFKKIQDAIDAVPSNNSELVFIWVKPGTYREKIVVPADKPFITLSGTLASNTIITWNETGDIFDSPTLSVLASDFVGRYITIENTYGKNGRAVALRVSGNKAAFYACRIISYQDTLLDDAGRHYYSNCYIEGATDFICGGAASFFEKCHLHSTSEGNGAITAQSRGAPTENTGFTFLRCKITGIGPATLGRPWGVYSRVIFAFTYMSSVIAPQGWNDWGDRSKHSTVYYGEFKCYGPGANREKRVKWSLGLSDTEAEPFLSKNMIGGRGWLRSPPTHFKRGSMNITIKASRNKLGEDENDFSDAIDEFQLQDHYIGGIALGETCALYQMIQTLVWVGSDVCIVGYGYVKLCYAAENTGTD* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02198 410 Gene3D - 39 331 IPR012334 -
Pte3g02198 410 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 32 322 - -
Pte3g02198 410 FunFam Pectinesterase 37 325 - -
Pte3g02198 410 Pfam Pectinesterase 44 317 IPR000070 GO:0030599|GO:0042545
Pte3g02198 410 SUPERFAMILY Pectin lyase-like 39 328 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g02198 Pte-Chr3 39297285 39300625 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02198 41 327 Carbohydrate Esterase AT5G07430 41.892 5.49e-82 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g02198 K01051 - qsu:112038609 503.442