Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02192 ATGCTGAATCACATTGACTGTCAAAACTCGAAAGAGTCACATTTGTCATCCGTTACATACAATATGACCCAATTCGCTTCTGTTATCTTTCTTTGTAGTACTTTCTTGTTCTTTGAATTAACTGTATCAGCCCCTCAAAATGCTCTTGTAACTAAAATTCCGGGCTTCAATGGCTTACTTCCTTCCAAGCACTATGCTGGGTATGTGACTGTGGATGAAATTCAAGGGAGGAGTTTGTATTACTATTTCGTTGTATCAGAAAGCAACCCATCAAAGGATCCAGTTGTCCTATGGCTTAATGGAGGACCCGGGTGCTCCAGCTTCGATGGTTTTGTATACGAGCATGGCCCATTCAATTTTGAGGCAGCAAAGCAAAAGGGAGACCTGCCTGTATTACACATTAATCCATACAGCTGGTCAAAGGTTTCCAACATTTTATATTTGGATTCCCCTGCTGGTGTGGGATTTTCATACTCTAAAAATCAAACTGATTACATCACTGGTGACTTGAAGACTGCATCTGATTCACATGCCTTTCTCCTAAAGTGGTTTATGCTGTACCCGGAGTTCCTTTCAAACCCATTCTTCATAGCTGGGGAGTCATATGCTGGAGTTTATGTGCCAACACTTGCTAATGAAGTGGTGAAAGGGATTGAAGCTGGCACAAAGCCTATTCTAAATTTCAAGGGCTACCTTGTAGGAAATGGTGTTGCAGATGAGATATTTGATGGGAATGCAATGGTTCCGTTTGCACATGGCATGGGTCTTATCTCAGATGATCTGTTTCAGGAAGTCTCTTCTCAGTGCAATGGGAACTATTACAAGCCACTTAATGAATCTTGCGAGGAAAAGCTGGCTGAAGTTGACAAGGATGTAGCTGGTTTAAACATATATGACATTTTAGAACCATGCTACCATGCCTCAAGTACATGGGATATTACAGCTTCCAACAGCAAGCTACCATCCAGTTTCAGGCGATTAGGTGAGACTGAGAGGCCTCTTCCTGTGAGAAAGAGGATGTTTGGCCGTGCCTGGCCCTTCAGAGCTCCTGTCCGAGATGGCATTGTTCCAACATGGCCAGAACTCCTCAACAGCGTATCTGTTCCATGCACTGATGATGAAGTTGCAACATCATGGTTGAATGACAACGGAGTTAGAAAAGCTTTGTACACTGTAGATGAAAGCTTTATCGATAAATGGGAGTTATGTACAGACAGAATCACATTTAAACATGATGCTGGAAGCATGATCATGTACCACAAGAACCTGACAATGAAGGGATACAGAGCTCTCATATACAGTGGTGATCATGACATGTGTGTTCCGTTCACTGGAAGTGAAGCATGGACAAGATCCCTAGGATACAAGGTTGTCGACGAATGGAGGTCATGGACATCCAATGGACAAGTTGCTGGGTACACAAGAGGATATGATAATAATTTGACCTTTCTGACCATAAAGGGTGCCGGGCATACAGTTCCAGAGTACAAGCCTAAAGAGGCATTGGACTTCTACAGCCACTTTTTGGCTGGAGAACCTATATGA 1545 0.4298 MLNHIDCQNSKESHLSSVTYNMTQFASVIFLCSTFLFFELTVSAPQNALVTKIPGFNGLLPSKHYAGYVTVDEIQGRSLYYYFVVSESNPSKDPVVLWLNGGPGCSSFDGFVYEHGPFNFEAAKQKGDLPVLHINPYSWSKVSNILYLDSPAGVGFSYSKNQTDYITGDLKTASDSHAFLLKWFMLYPEFLSNPFFIAGESYAGVYVPTLANEVVKGIEAGTKPILNFKGYLVGNGVADEIFDGNAMVPFAHGMGLISDDLFQEVSSQCNGNYYKPLNESCEEKLAEVDKDVAGLNIYDILEPCYHASSTWDITASNSKLPSSFRRLGETERPLPVRKRMFGRAWPFRAPVRDGIVPTWPELLNSVSVPCTDDEVATSWLNDNGVRKALYTVDESFIDKWELCTDRITFKHDAGSMIMYHKNLTMKGYRALIYSGDHDMCVPFTGSEAWTRSLGYKVVDEWRSWTSNGQVAGYTRGYDNNLTFLTIKGAGHTVPEYKPKEALDFYSHFLAGEPI* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02192 514 ProSitePatterns Serine carboxypeptidases, histidine active site. 481 498 IPR033124 GO:0004185
Pte3g02192 514 FunFam Carboxypeptidase 369 513 - -
Pte3g02192 514 FunFam Carboxypeptidase 416 511 - -
Pte3g02192 514 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 51 498 IPR001563 GO:0004185|GO:0006508
Pte3g02192 514 FunFam Carboxypeptidase 43 327 - -
Pte3g02192 514 ProSitePatterns Serine carboxypeptidases, serine active site. 197 204 IPR018202 GO:0004185
Pte3g02192 514 SUPERFAMILY alpha/beta-Hydrolases 50 513 IPR029058 -
Pte3g02192 514 PRINTS Carboxypeptidase C serine protease (S10) family signature 481 494 IPR001563 GO:0004185|GO:0006508
Pte3g02192 514 PRINTS Carboxypeptidase C serine protease (S10) family signature 135 147 IPR001563 GO:0004185|GO:0006508
Pte3g02192 514 PRINTS Carboxypeptidase C serine protease (S10) family signature 183 208 IPR001563 GO:0004185|GO:0006508
Pte3g02192 514 PRINTS Carboxypeptidase C serine protease (S10) family signature 148 158 IPR001563 GO:0004185|GO:0006508
Pte3g02192 514 Pfam Serine carboxypeptidase 54 510 IPR001563 GO:0004185|GO:0006508
Pte3g02192 514 Gene3D alpha/beta hydrolase 42 341 IPR029058 -
Pte3g02192 514 Gene3D - 366 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g02192 Pte-Chr3 39203709 39208555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02192 375 515 Calmodulin-binding Proteins AT2G22960 48.936 5.05e-41 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g02192 K16296 - cave:132166195 825.083