Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02172 ATGTTCCTGTCTTTCCTCTCCATCTCCTTGCTCTTGTCTTCTGCAACCTCAACTTCTGCTACTGCCACTCAAGCTAATAGGAGAATACTACATCAACCCTTTTTCCCATTGGACTCACTTCCACCATCTCAACCTCCATCTCCTTCTCCACCTGCCGTTTCTTCATCGACACTACCACCGCCAACCCCGCCAAATCCCAAGTACCCATTTTCCTCTACGACACCTGATCAGTCTCCATTTTTTCCGACTTACCCTTCACCTCCACCCCCACCTTCACCATCTTCCTTCGCTTCATTCCCAGCTAATATATCCTCTCTTATCCTTCCTCAGACCCCAAAGCCCAAATCCTCTTCTTCTAAGCTCTTCGCCATTGCTATTGCTGCCGTTGTTTCAGCTGTTGTGGTTGTCGGCATTTCGCTCTTCTTCTATTATCGCAGGAGAAGACGGTATGACTCTTCCGACAGTAAGACTCACAGATCCGAGAATAGTAGCAGGTTGTTCTCTAACCGCGTGGAGAACACGAACAGCAACAACAATGGTACCCGTAAAGTGAGAGCTAGTTCTTCTGCTAGCTCTGAGTTTCTGTATTTGGGTACCATTGTTAACTCTCGAGGTATGGATGATCGGCCTGAAGCTCATAACAATGGTGGTGGTGCGGGTAACAGTAATGGGAATGAGGGGTTGGGTTTGGATCCTCGTAAAATGGACTCTCCCGAGTTGCGACCGCTTCCACCACTTGCAAGACAGACTTCGATGCTTCATGGTGGTAATATTGATGTGGGTTCAACTGGAGATGATGAAGAAGAATTCTATTCACCAAGAGGGTCACTGGGTGGAAGAGAAAGTTCCACCGGTACTGGATCGGGTTCTAGAAGAGTTTTTCCCACCATTGCAGGTGAGAATTTTGGTGGAAGGAACAGTGATTCAAACTCAACTTCATCTTCATCTTCAACTTCAGGTTCGCCAGTGAGGTCACATTCAATTAGCTTATCTCCACCAGTGAGCTTGAGTCCCAGGAGGTCACAGCCTAAGTCACCAGAATCTACTGCTGTTTGTGGTCCACAGTCATCTCTGCCATTATCGCCACAGTTGATTGAGAAGCAACGATCTAGTTCACCATCTCCATTGTCATCTCCTGAGAGAAAGCCAGATGGGTCACCGACAATTTCTCATGGTCCACAGCATATTGTGCATTCTCCTTCATTGTCTTCACTTTCTTCAACTCCAGGTAGAGGGTTTGGTGTGAATGGGCAGTCTTCTCCTTCTCCATCTCCACCTTCTACTTCCCCAGATAGGCTTCTGCAGAAGTGCACAGATGAGATATCATCAACATCAGCAAGGGAGAGAGTGTCTAATGCTTCAGGCCAAAGCAAGTTGTCATCTTTGTCATCCTCATCTTCTTCTTCACCGGAGAGATTTGTGGAGAAGAATTTGTATGCATCATCACCAAGACTTTCAAATGCTTCAGAAAGATATGGAAAGTCTGTTTTGGCATCTCCAGTTTTCTCACCTTCATTGCTTTCATCACCAGAGAGGGGGTGGGAGAAGAACTTGCTTCAGTCTCCAGGAGTTCCAAATGCTTCAGATCAGAATAGGGTTTTCTTACAATCACCTCCTTCATCATCACCAGAGGGAGAACTCAACAATGTTTTTGATCAATCACCTAGAATTTCAAGAGTTTCAGATCGAAAGGTGCAGTCTGTAGAAGGAAATGTCAGAGCTTTACCGCAGGTTCCTATGGTTTCAGCCCCACGACCGCCACCGCCTCCTCCGCCACCTCCTCGTTTCAATCATCTACCAAACAGACAATGGGAACCTCGGACACCAACTACTCCAACTGACCCGCCTATCTCTAGGCCACCTGAACTGAGACCTCCTTCTAGGCCATTTGTGTTACAAACCCCAACAAAGGTCTCCCCTGTTGCGCTGCCTCCATGTCCTGAAAATATGGAGATTTTTTATGATACTAGTAAACCAAAGTTAAAGGCGTTACATTGGGATAAAGTAAGAGCAAGCTCTGGTCGTGAAATGGTGTGGGATCAACTGAGATCAAGCTCATTTAAATTAAATGAAGAGATGATAGAGACATTATTTGTCGTGAACACTCCGAATAACAAACCCCAGGAAACAACCCCAAGATCAGTTCTTCCATCTCAGAATCAAGAGAACAGAGTACTTGACCCAAAAAAGGCGCAAAACATTTCTATTTTGCTTAGGGCTCTTAATGTGACGATAGAGGAAGTCTGTGAAGCTCTATTGGAAGGTAATGCAGATACTCTTGGGACGGAATTGTTAGAAAGCTTATTGAAGATGGCACCAACTTTGGAAGAAGAACGCAAACTAAAGGAGTACAAAGATGACTCTCCTATGAAGCTTGGTCCAGCTGAGAAATTCCTCAAGGCGCTGCTTGATATCCCGTTTGCTTTTAAAAGAGTGGAGGCAATGTTGTACATAGCCAATTTTGAGTCTGAAGTCGAGTACCTTAGAAAGTCTTTTGAAACTCTTGAGGTTGCCTGTGAAGAGCTTAGAAATAATAGGATGTTCTTAAAGCTTCTAGAAGCTGTCTTGAAAACCGGTAACAGGATGAATGTTGGGACTAATCGCGGCGATGCCCAAGCTTTTAAGCTAGACACTCTTCTTAAGCTTGTTGATGTCAAAGGTGCAGATGGTAAAACCACACTCTTGCATTTTGTTGTACAAGAGATCATAAGAACTGAAGGTGCTCGGTTCTCAGGCATTAATCAAACCCCAAATCCTGGTCTGAGCGAAGATGTCATGTGTAGAAAGCTTGGCCTGCAAGTTGTTTCTGGTCTCAGTTCTGAGCTAACAAATGTGAAGAAAGCTGCAGCAATGGACTCGGAAGTGCTAAGCAATGAAGTCTCTAAGCTATCTAGAGGAATTGCAGGAATTGCAGAAGTGGTTCGTTTGAATGAACCAGTTGAATTAGATCAGAGAAGCACATTTTCTGAATCATTGAACAAGTTCATGATAATGGCAGAAGAGGAAATTCTCAAAATTCAAGCCCAGGAAAAAGTTACATTATTTCTAGTGAAGGAGATAACAGAGTACTTCCATGGGAATTTGGCCAAGGAAGAAGCTCATCCATTTAGAATATTTATGATTGTCAGGGACTTCCTAAATGTTCTTGACAGGGTCTGCAAAGAAGTTGGTATGATCAACGGACGAACCACAGTCAGTTCTGCACATAGATTTCCAGTTCCAGTGAATCCCATGTTGCCTCAACCTCTACCAGGTCTGTATGGAAAAAGAAATTATAGCTTATCTGATGACGAGAGTGCATCTCCATAG 3309 0.4442 MFLSFLSISLLLSSATSTSATATQANRRILHQPFFPLDSLPPSQPPSPSPPAVSSSTLPPPTPPNPKYPFSSTTPDQSPFFPTYPSPPPPPSPSSFASFPANISSLILPQTPKPKSSSSKLFAIAIAAVVSAVVVVGISLFFYYRRRRRYDSSDSKTHRSENSSRLFSNRVENTNSNNNGTRKVRASSSASSEFLYLGTIVNSRGMDDRPEAHNNGGGAGNSNGNEGLGLDPRKMDSPELRPLPPLARQTSMLHGGNIDVGSTGDDEEEFYSPRGSLGGRESSTGTGSGSRRVFPTIAGENFGGRNSDSNSTSSSSSTSGSPVRSHSISLSPPVSLSPRRSQPKSPESTAVCGPQSSLPLSPQLIEKQRSSSPSPLSSPERKPDGSPTISHGPQHIVHSPSLSSLSSTPGRGFGVNGQSSPSPSPPSTSPDRLLQKCTDEISSTSARERVSNASGQSKLSSLSSSSSSSPERFVEKNLYASSPRLSNASERYGKSVLASPVFSPSLLSSPERGWEKNLLQSPGVPNASDQNRVFLQSPPSSSPEGELNNVFDQSPRISRVSDRKVQSVEGNVRALPQVPMVSAPRPPPPPPPPPRFNHLPNRQWEPRTPTTPTDPPISRPPELRPPSRPFVLQTPTKVSPVALPPCPENMEIFYDTSKPKLKALHWDKVRASSGREMVWDQLRSSSFKLNEEMIETLFVVNTPNNKPQETTPRSVLPSQNQENRVLDPKKAQNISILLRALNVTIEEVCEALLEGNADTLGTELLESLLKMAPTLEEERKLKEYKDDSPMKLGPAEKFLKALLDIPFAFKRVEAMLYIANFESEVEYLRKSFETLEVACEELRNNRMFLKLLEAVLKTGNRMNVGTNRGDAQAFKLDTLLKLVDVKGADGKTTLLHFVVQEIIRTEGARFSGINQTPNPGLSEDVMCRKLGLQVVSGLSSELTNVKKAAAMDSEVLSNEVSKLSRGIAGIAEVVRLNEPVELDQRSTFSESLNKFMIMAEEEILKIQAQEKVTLFLVKEITEYFHGNLAKEEAHPFRIFMIVRDFLNVLDRVCKEVGMINGRTTVSSAHRFPVPVNPMLPQPLPGLYGKRNYSLSDDESASP* 1103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02172 1102 Coils Coil 825 845 - -
Pte3g02172 1102 MobiDBLite consensus disorder prediction 34 95 - -
Pte3g02172 1102 PANTHER FORMIN-RELATED 419 1083 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Pte3g02172 1102 MobiDBLite consensus disorder prediction 166 187 - -
Pte3g02172 1102 MobiDBLite consensus disorder prediction 580 599 - -
Pte3g02172 1102 MobiDBLite consensus disorder prediction 302 384 - -
Pte3g02172 1102 Gene3D Formin, FH2 domain 654 1058 IPR042201 -
Pte3g02172 1102 Pfam Formin Homology 2 Domain 656 1049 IPR015425 -
Pte3g02172 1102 MobiDBLite consensus disorder prediction 521 556 - -
Pte3g02172 1102 MobiDBLite consensus disorder prediction 80 95 - -
Pte3g02172 1102 MobiDBLite consensus disorder prediction 277 291 - -
Pte3g02172 1102 MobiDBLite consensus disorder prediction 429 473 - -
Pte3g02172 1102 MobiDBLite consensus disorder prediction 609 627 - -
Pte3g02172 1102 ProSiteProfiles Formin homology-2 (FH2) domain profile. 651 1075 IPR015425 -
Pte3g02172 1102 MobiDBLite consensus disorder prediction 205 473 - -
Pte3g02172 1102 MobiDBLite consensus disorder prediction 151 165 - -
Pte3g02172 1102 MobiDBLite consensus disorder prediction 151 187 - -
Pte3g02172 1102 MobiDBLite consensus disorder prediction 38 70 - -
Pte3g02172 1102 SMART it6_source 651 1064 IPR015425 -
Pte3g02172 1102 MobiDBLite consensus disorder prediction 392 422 - -
Pte3g02172 1102 SUPERFAMILY Formin homology 2 domain (FH2 domain) 584 1056 - -
Pte3g02172 1102 MobiDBLite consensus disorder prediction 499 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g02172 Pte-Chr3 38484210 38489339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02172 604 1090 FH2 protein (formin) Gene Family AT3G25500 75.051 0.0 734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g02172 - - qsa:O6P43_017041 1144.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g02172 3 38484210 38489339 Pte3g02172 3 38484210 38489339 RCT