Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02171 ATGGTCTCTTTGTCTTCCTCATTTTCTCAGCCACGTTTCTCTTGCTCCATCCTATCGCAACCGTTGGTTACCTCGATCCAACTTTGTGAAGATGACTCCGGACTCGACTCCAAGTCTGTCTCTGCCCTCCATGACTGCTTCAGCAACTTAAGTGATGCAGTAGATGAAATACATGGCTCATTGAAACAGATGCGCCAGTTGGGTGCCATTGGAACTGGGATCGAGTCGTTCAAGTTTCATATGAGTAATGTGCAGACATGGATGAGTGCCGCTTTGACAGATGAAGAAACTTGCACGGACGGGTTTCAGAATGTGCCTGATGGACCTGTGAAGAATGATCTTTATGAAGGAGTCACTGATATGAAGAAGTTCATAAGCAATGCTTTAGCTTTGCCCAGATTTCACGTTCGGGCTAAGCGAACGCGGGCCGAAAGCGGGTTTGGTCCCGGATTGGCACAAACGCAGGCGTTTACGAACGGCCGAAACGAAAGCATATTTTAG 501 0.477 MVSLSSSFSQPRFSCSILSQPLVTSIQLCEDDSGLDSKSVSALHDCFSNLSDAVDEIHGSLKQMRQLGAIGTGIESFKFHMSNVQTWMSAALTDEETCTDGFQNVPDGPVKNDLYEGVTDMKKFISNALALPRFHVRAKRTRAESGFGPGLAQTQAFTNGRNESIF* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02171 166 Gene3D Invertase/pectin methylesterase inhibitor family protein 19 133 IPR035513 -
Pte3g02171 166 PANTHER PECTINESTERASE INHIBITOR-LIKE 39 131 - -
Pte3g02171 166 CDD PMEI-like_3 31 131 - -
Pte3g02171 166 SMART PMEI_2 3 131 IPR006501 GO:0004857
Pte3g02171 166 MobiDBLite consensus disorder prediction 147 166 - -
Pte3g02171 166 NCBIfam pectinesterase inhibitor domain 25 131 IPR006501 GO:0004857
Pte3g02171 166 Pfam Plant invertase/pectin methylesterase inhibitor 37 131 IPR006501 GO:0004857
Pte3g02171 166 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 132 IPR035513 -
Pte3g02171 166 MobiDBLite consensus disorder prediction 151 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g02171 Pte-Chr3 38468970 38475531 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02171 27 133 Carbohydrate Esterase AT1G53830 30.556 3.29e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g02171 - - cam:101503417 152.91