Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02164 ATGGATGTTGCACCAATGAAGGTTTATAATAGCCATGTAGTACTATTAGTTTCAATTGTTTTTGCTCATGCCATGGCTTTTGCTTCATCAGCTCCCCCAATGGACTTCTCAACTGCTTTTCTCATTAGAGTAGATCAGTCAGGTAATGGTGATTTCAAGAAGATACAAGATGCTATAGATGCCGTTCCATCCAATAACTCAGAACTGGTCTTTATTTGGGTTAAACCAGGAACATACAGAGAAAAGATAGTTGTACCAGCTGATAAACCTTTCATCACACTGAGTGGAACTTTGGCTTCCAACACAATAATCACATGGAATGAAACTGGAGACATATTCGATTCCCCTACACTATCTGTCCTGGCATCCGATTTCGTGGGGCGATACATTACAATAGAGAATACGTATGGGAAAAATGGTAGGGCAGTTGCCCTGAGGGTTTCAGGGAATAAAGCTGCATTCTATGCTTGTAGGATTATTTCCTACCAAGACACTTTGTTGGATGATGCTGGTAGACATTACTATAGCAATTGCTATATCGAAGGTGCTACTGATTTCATATGTGGAGGTGCTGCTTCTTTCTTTGAAAAGTGCCATCTTCACTCAACTTCTGAAGGTAATGGTGCAATTACTGCTCAGTCCAGGGGAGCACCAACTGAGAACACTGGCTTTACATTTCTAAGATGCAAAATCACTGGTATAGGTCCAGCTACACTTGGAAGGCCATGGGGGGTTTACTCTAGAGTAATTTTTGCCTTTACCTACATGTCTAGTGTCATAGCACCACAAGGCTGGAATGACTGGGGAGACCGAAGCAAGCACAGTACTGTATACTATGGAGAGTTCAAATGCTACGGTCCTGGTGCGAATAGAGAAAAGAGGGTGAAATGGTCACTTGGATTATCAGACACTGAGGCTGAACCCTTCTTGAGTAAGAACATGATTGGAGGCAGAGGCTGGCTTAGATCCCCACCAACTCACTTCAAGCGAGGCTCAATGAATATTACAATTAAGGCTAGTCGAAACAAGCTGTAA 1035 0.4251 MDVAPMKVYNSHVVLLVSIVFAHAMAFASSAPPMDFSTAFLIRVDQSGNGDFKKIQDAIDAVPSNNSELVFIWVKPGTYREKIVVPADKPFITLSGTLASNTIITWNETGDIFDSPTLSVLASDFVGRYITIENTYGKNGRAVALRVSGNKAAFYACRIISYQDTLLDDAGRHYYSNCYIEGATDFICGGAASFFEKCHLHSTSEGNGAITAQSRGAPTENTGFTFLRCKITGIGPATLGRPWGVYSRVIFAFTYMSSVIAPQGWNDWGDRSKHSTVYYGEFKCYGPGANREKRVKWSLGLSDTEAEPFLSKNMIGGRGWLRSPPTHFKRGSMNITIKASRNKL* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02164 344 FunFam Pectinesterase 37 325 - -
Pte3g02164 344 Gene3D - 39 331 IPR012334 -
Pte3g02164 344 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 32 322 - -
Pte3g02164 344 SUPERFAMILY Pectin lyase-like 39 328 IPR011050 -
Pte3g02164 344 Pfam Pectinesterase 44 317 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g02164 Pte-Chr3 37909955 37911651 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02164 41 327 Carbohydrate Esterase AT5G07430 41.892 3.88e-83 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g02164 K01051 - qsu:112038609 503.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g02164 3 37909955 37911651 Pte3g02164 3 37909955 37911651 RCT