Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02157 ATGCAAGAGGATAAAAAGATGAAGATCAAGAAGGGATGGCTTGCAGTGCAAGTGGAGTCAGAGGAGGAAGATGGAGGAGTCACACAGAGATTTGTAATCCCCATATCTTATCTTTACCATCCTCTATTCCAAAGGCTACTGGAGAAAGCTCATGAGATTTATGGAGGGTTTGTTTTGGACGTTCTTAGCTTTATGTTTATGGATAATCTGCCAATGGCTGTGCAACAGATCGCATTCGGATCGATATGTCAAAACTCGAACCCAACTCGACCTAAACAACAATCGAATCTGAATGGATAA 300 0.4167 MQEDKKMKIKKGWLAVQVESEEEDGGVTQRFVIPISYLYHPLFQRLLEKAHEIYGGFVLDVLSFMFMDNLPMAVQQIAFGSICQNSNPTRPKQQSNLNG* 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02157 99 Pfam Auxin responsive protein 8 55 IPR003676 GO:0009733
Pte3g02157 99 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 56 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g02157 Pte-Chr3 37596461 37597320 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02157 9 55 Calmodulin-binding Proteins AT3G43120 48.936 3.63e-07 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g02157 K14488 - rvl:131303597 96.2857