Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02152 ATGGCTGGCTCGATTCAGGAATCCAAATCTCAGAGAATAGGAATGAAGTGGCTTACACTCCTGATTAGCATATCAGTTTGCTATGCATCCGTGGGGCCAGATGTAGAAGGTGAAGCTTTGATTGAACTGTTAGCAGCTCTTAATGATTCCAATAATCTCATTCATTGGGATAGCCATCAAGTCAGCCCTTGCTTTAGTTGGTTGAATGTCGTCTGCCGAAATAACAATGTCATATCTCTGACCCTGGGTTCAAATGGATTTACTGGAACAATATCTCCTGCTATCACCAAACTGAAATTTCTAATGACATTGGAACTGCAGAACAACAACCTTTCAGGTTTGCTGCCTGATTTCATTGCCAACTTGACACATCTGCAAAATCTTAATCTTGGAAATAACAAATTCACTGGTCTTATTCCTGCAACATGGGGTCAACTGTCCAGCCTGAAGCATTTGATTTTGAAGGAGAACCATCTATCTGGAACTATACCGAGTGCAATTGCGAATATCACAGGCCTAGCAGAATTGGATCTTTCATCTACTGATTTAGTGGGAAGCATCCCAGAAAAATTATTATCTGTTCCAATATACAACTTTACAGGTACTCACCTCAGTTGTGGCTCCGGGTCAGGGCAGCAATGTGCTTCCAGATCTCCCATTTCAGCTTCGAATGGTAAATCAAAAGTTGAGGCAGTCATAATATCTGCCAGTTGTGGTGTATTCGCACTTCTATCTCTGGGGGCTGTCTTTGCATATCTTTACCACTATATACATAGATTCAAGAAGGATGTCTTTTATGACGTTTCAGGAGAAGATGAGAGTAAAATTACCTATGCACAGCTAAGAAGGTTTTCTTTGCGTGAAATTCAGCTTGCTACTGGAAACTTCAGTGAGATCAATATAATAGGGCAAGGGGGTTTCGGGAAAGTTTATAAAGGAGTGCTCTCAGATAGCACAAAAGTTGCTGTAAAACGCTTGTCAGATTATTATAGTCCTGGTGGGGAGGCTGCATTTCAACGAGAAGTTCAATTAATAACTGTTGCAGTTCACAGGAACCTATTAAGATTAATTGGGTTTTGTGCAACCTCAACTGAAAGGATTCTTGTATATCCATATATGCAAAATCTTAGTGTTGCAAATCACTTGAGAGATCTAAAACCTGGGGAGAAATGCTTGGACTGGCCAACAAGGAAACGTATTGTTTTTGGTGCAGCTCATGGTTTGGAGTATCTGCATGAACATTGCAATCCTAAGATTATACATCGTGATCTAAAGGCTGCAAATATTCTTCTAGATGATAAATTTGAAGCTGTTCTTGGAGATTTTGGTTTGGCCAAATTGGTTGAAACAAGATTGACTCAAGTTACCACCCAAATTCGCGGTACAATGGGTCATATTGCCCCTGAATATTTGTCCACAGGAAAGTCTTCAGAGAAGACAGACATTTTTGGTTATGGTATCACGCTTCTTGAAATCATTACTGGTCAGCGTGCGATAGATTTCTCCAGGCTCGAAGAGGAGGAGGATGTTCTGCTGCTTGATCATATTAAGAAGTTACTGAGAGAAAATAGACTTGAAGACATTGTGGATGGAAATCTGAAGACTTATGATCCGAAGGAATTGGAGACCCTAATTCAGGTTGCGTTGCTGTGCACCCAAAGCATGCCAGAGGATCGTCCAAGAATGACAGAAGTGGTGAAAATGCTGGATGGGGTTGGTCTTGCTGAGAGATGGGCTGAATGGGAACAACTAGAAAATGTGAGGAATCAAGAATATTCTCTCATGTCTCATCAGTTTGTTTGGGGTGAAGAATCAACAGAAGATCAAGAGGCTATTCAGCTTTCAAGAGCAAGATAG 1857 0.4093 MAGSIQESKSQRIGMKWLTLLISISVCYASVGPDVEGEALIELLAALNDSNNLIHWDSHQVSPCFSWLNVVCRNNNVISLTLGSNGFTGTISPAITKLKFLMTLELQNNNLSGLLPDFIANLTHLQNLNLGNNKFTGLIPATWGQLSSLKHLILKENHLSGTIPSAIANITGLAELDLSSTDLVGSIPEKLLSVPIYNFTGTHLSCGSGSGQQCASRSPISASNGKSKVEAVIISASCGVFALLSLGAVFAYLYHYIHRFKKDVFYDVSGEDESKITYAQLRRFSLREIQLATGNFSEINIIGQGGFGKVYKGVLSDSTKVAVKRLSDYYSPGGEAAFQREVQLITVAVHRNLLRLIGFCATSTERILVYPYMQNLSVANHLRDLKPGEKCLDWPTRKRIVFGAAHGLEYLHEHCNPKIIHRDLKAANILLDDKFEAVLGDFGLAKLVETRLTQVTTQIRGTMGHIAPEYLSTGKSSEKTDIFGYGITLLEIITGQRAIDFSRLEEEEDVLLLDHIKKLLRENRLEDIVDGNLKTYDPKELETLIQVALLCTQSMPEDRPRMTEVVKMLDGVGLAERWAEWEQLENVRNQEYSLMSHQFVWGEESTEDQEAIQLSRAR* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02152 618 Gene3D Phosphorylase Kinase; domain 1 265 372 - -
Pte3g02152 618 ProSiteProfiles Protein kinase domain profile. 296 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g02152 618 ProSitePatterns Protein kinases ATP-binding region signature. 302 324 IPR017441 GO:0005524
Pte3g02152 618 SMART serkin_6 296 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g02152 618 Gene3D Transferase(Phosphotransferase) domain 1 373 589 - -
Pte3g02152 618 Pfam Protein kinase domain 297 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g02152 618 Pfam Leucine rich repeat N-terminal domain 35 72 IPR013210 -
Pte3g02152 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 419 431 IPR008271 GO:0004672|GO:0006468
Pte3g02152 618 Gene3D Ribonuclease Inhibitor 33 216 IPR032675 -
Pte3g02152 618 SMART LRR_typ_2 98 121 IPR003591 -
Pte3g02152 618 SMART LRR_typ_2 146 169 IPR003591 -
Pte3g02152 618 SMART LRR_typ_2 122 145 IPR003591 -
Pte3g02152 618 FunFam Nuclear pore complex protein NUP107 34 189 - -
Pte3g02152 618 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 19 580 - -
Pte3g02152 618 Pfam Leucine rich repeat 124 183 IPR001611 GO:0005515
Pte3g02152 618 SUPERFAMILY Protein kinase-like (PK-like) 274 569 IPR011009 -
Pte3g02152 618 FunFam Somatic embryogenesis receptor kinase 1 265 372 - -
Pte3g02152 618 SUPERFAMILY L domain-like 38 197 - -
Pte3g02152 618 FunFam Somatic embryogenesis receptor-like kinase 1 373 589 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g02152 Pte-Chr3 37432267 37437343 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02152 11 619 Receptor kinase-like Gene Family AT5G10290 55.719 0.0 668
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Pte3g02152 Pkinase 1.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g02152 - - jre:108996276 901.353