Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02124 ATGGCATCCTCCAGCTCATTGGCCTCAACTGCCTCACAAAAGCACATAGTGTATTTCAGCTATCATGCGGAGGATCCACTGAAGTACGTTCCTGAGATAATAAGCCAATCTCTTGATAAGCGAGGAGTCTCTATCTTCAAAGATGTTCAGCAGATTAAAGGAAAGCAAGTTGGAGTTGATCTTGGAAGAAGCATACGAGAAGCAATTGGGATTGCAAAAATTTGTGTAGTTTTCATTTCCAAAGATTATGTACACTCAAGTTGGTGCCTTGAAGAACTAGTAGAGATATTCAAGTGTAGAAAGAAATGGGGTTCGATGATTGTGCCCATTTTCTATGAAATCGATCCATCAGATGTGAGAAAGCAAAGAGGTGATGCTTTCAGAATAGTGAATGAACAGACCAAAGGTGGGTTGTGGTGGACAAGGTGGAAGTCTGCTTTGAAAGATGTTGCCAATTTGTGTGGCTGGGATAATCGCCACAGCACAGATCATTCTCCATCACGATTTGTGGGTGACATTGTGACAGACATATTGGACAAGCAAATACCTTCCATTTTCACAATTTCACTGTACCCAGTTAGATTTGATAGTTGTGATCAATACTTGAATCTCTTCTTGCATGCTGGGATGGATGATGTTATTATACAAGGAATATGTGGACCAAGTGGAATGGGGAAAACCGAAATTGCCAAGTCTATATATGAAGATATGTGTTGGACATATGATGGGAGTTGCTTTCTACCAACCATAAGCACTTATGCAAGAAAGCCTGATGGTTTAGTTGAGTTACAGGAAAAACTTCTCAGTGATATACTTGGAGAGGACATAGATATATCAAATGTTACAAGAGGAATGAATGTCATCAAAGAACAATTGTGCTTCAAGAGAGTTCTAATTGTTCTTGATGATATTGATGATCTGAATCAGTTGCAAGCATTGGTTGGGGAGAGGAGTTGGTTTGGTTTGGGAAGTAAGATTATCATTACAAGTAGGAGCTACTCATTGTTGAAACTGTTTGGAGCTGACCAAATATTTTCAGCAAGAGGGAATCCACTTCCTTCCAATATACAGGTCATTTGGAAGCAATACTTGCAAAGTCGGAGAATGATTGCAAGGTTGAATCAGTATATTGAAGATATGAAGGAATTGACAACAACAACGGAAAGGTATCTAAATGCAACATTACTTCAAGAGCGTCGAAGGAATATTACTCAGGGAGAGGTGGCTGCAACCTTGAAGGTATACCAAGATAGAGCCGGCCACGGAGTGACTAAGTCCAAACTTCGGTTAACCGAGTTGGATTAA 1305 0.4 MASSSSLASTASQKHIVYFSYHAEDPLKYVPEIISQSLDKRGVSIFKDVQQIKGKQVGVDLGRSIREAIGIAKICVVFISKDYVHSSWCLEELVEIFKCRKKWGSMIVPIFYEIDPSDVRKQRGDAFRIVNEQTKGGLWWTRWKSALKDVANLCGWDNRHSTDHSPSRFVGDIVTDILDKQIPSIFTISLYPVRFDSCDQYLNLFLHAGMDDVIIQGICGPSGMGKTEIAKSIYEDMCWTYDGSCFLPTISTYARKPDGLVELQEKLLSDILGEDIDISNVTRGMNVIKEQLCFKRVLIVLDDIDDLNQLQALVGERSWFGLGSKIIITSRSYSLLKLFGADQIFSARGNPLPSNIQVIWKQYLQSRRMIARLNQYIEDMKELTTTTERYLNATLLQERRRNITQGEVAATLKVYQDRAGHGVTKSKLRLTELD* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02124 434 Pfam TIR domain 14 180 IPR000157 GO:0007165
Pte3g02124 434 Gene3D - 179 342 IPR027417 -
Pte3g02124 434 Gene3D - 9 178 IPR035897 -
Pte3g02124 434 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 56 339 IPR044974 GO:0006952
Pte3g02124 434 SMART till_3 14 153 IPR000157 GO:0007165
Pte3g02124 434 PRINTS Disease resistance protein signature 215 230 - -
Pte3g02124 434 PRINTS Disease resistance protein signature 291 305 - -
Pte3g02124 434 ProSiteProfiles TIR domain profile. 13 181 IPR000157 GO:0007165
Pte3g02124 434 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 156 IPR035897 -
Pte3g02124 434 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 194 356 IPR027417 -
Pte3g02124 434 Pfam NB-ARC domain 212 337 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g02124 Pte-Chr3 36849972 36860625 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02124 37 359 WRKY Transcription Factor Family AT4G12020 24.390 4.68e-20 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g02124 - - qsa:O6P43_026798 466.463