Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02120 ATGCTCTGGGGAGGCATGTCAAGTATGATGACTACATCAAAATTCATGAACTTCCAGTTTTGGGCAGCATGTGTAGACTTGATGAACTCAACCTGCTTGTGGGAGCACATAAATATACCGGTGCAACTGGGATTTCTTGGAATCTTACTGTTTCAAAGTCTAAAGAAAGGCAAGAGCCTCTTATGCGGAGAAAAGGACTTAGATGAACAGATGTCCATATATCTCACTTCAGTAACAAATGGACTTGCTTACAGAGCAAGCATAGCTTGTTCCAGTTTACTATTGGCTTTTCATATATTGATGCTGATATTAGTCTGCACGAAGGGAGAGACTCAATGCAACGATGGATCATTGGCTGTTATATCAGAAACTATGTCAGTTCTTTCATGGACAATTGCACTAGCTGCAGTTTACATGACTTCTAAAAGATGCACTAGATTCCCATGGATTCTAAGAATATGGTGGATGTGCAGTTTCTTGATGTCTATCTTGTGTGCAGCCCTTCACTTCTCTTTCATTATTGCAAACAAGTGTCTGTTTGGATTGAGAGAATGCGTAGAACCAATTAGTCTGCTGGGAATAACATACCTATTGTGCATTGCAATCCGAGGGAGGACAGGAACCATGCTGGTTGTTCAAAATGGCATCAACGATCCACTTCTCGGTGAGAAAATGGAAAAGGGATCTAAATGCAAAGTGAAATCTCCATATGGGAAAGCGACATTTCTCCAACTTATTACCTTCTCTTGGCTGAACCCTTTGTTTTCTGTTGGATATAAGAAACCTTTGGAATTGAGTGATATTCCAGATGTTGATATCAACGATTGTGCTGACTTCGTTTCTGCCTCTTTTGATGAGAGACTTGAACATGTGAAACAGAAAGAAATGAGCACAAACCCATCTATCTACAAAGCAATCTTTCTATTTGCAAGGAAGAAAGCATTAGTGAATGCCGTATTTGCAATTGTAAGTGCAGCATCATCATATGTTGGACCATACCTCATCTCTGACTTTGTAAGTTTTCTGGCAGAGAAGAAAAATGAGAGTTTAAGAACTGGCTACCTTCTTTCACTTGCTTTTCTTTGTGCTAAAACAGTTGAGACAATAGCGCAAAGGCAATGGATTTTCGGTGCCCGTCAGCTTGGTCTCCGGCTTAGAGTAGCACTGGTAGCTCGTATATACAAGAAAGGTTTAGTTCTCTCAAGTAGATCCCGGCAAAGCCGTACGAGTGGGGAAATGGTAAATTATATGAGTGTAGATGTGCAGAGAATCACAGACTTCATTTGGTACGTAAATTCAGTGTGGATGCTGCCTGTGCAAGTTTCTTTGGCAGTATTCATTCTACATACAAACTTAGGCTTGGGGTCATTAGCTGCATTAGCTGCAACACTCGCAGTGATGGCTTTGAACATCCCTCTCACAAGAATTCAAAAGAGATACCAATCCAAGATCATGGAGTGTAAAGACAACAGAATGAAGGCCACTTCAGAAGTTCTTCGAAATATGAAGACATTAAAACTTCAAGCATGGGATAGTCAGTTCCTTCAAGGAATAGAAGAATTGAGGAAGCTAGAGTACAATTGGTTGTGGAAGTCATTGATGCAGTCAGCATTGTCAGCTTTTATCTTTTGGGGTTCTCCCACATTCATGTCCGTGGTCACATTCGTCACATGTTATCTAATGGGGATTGATCTCACAGCTGGGAGGGTGTTGTCTGCATTAGCAACTTTCCGAATGCTTCAGGATCCCATATTCAATCTCCCTGATTTACTCTCAGTAATAGCACAAGGAAAAGTTTCTGCAGACAGAATCGCTTCATTTCTCCAGGAGGAAGAAGTTCAGGCGGATGCTGTCGAGTATGTTCCAAGGGATCAAACGGAGTTTGACATCGAAATTAGTAAAGGGAAATTTAGCTGGGATCCAGAGTCAAGCATTCCAACCCTTGATGGAATTGATTTGAAAGTTAAGAGAGGAATGAAGGTTGCAATTTGTGGGATGGTTGGCTCAGGAAAGTCCAGCCTCCTTTCATGCATTCTTGGAGAAATACATAAACTGTCAGGCAATGTCAAGGTGAGTGGAACGAAAGCTTATGTTCCACAGTCACCATGGATACTGACTGGGAATATTAAAGAGAACATAATCTTTGGCCAAGAGTACAATGGAGACAAGTATGAAAAAACCACTGAAGCATGTGCTTTGATAAAGGACTTTGAATTATTTTCCTGCGGTGACCTTACAGAGATCGGAGAAAGAGGAATAAACATGAGTGGAGGACAAAAGCAAAGGATACAGATAGCTCGTGCTGTTTACCAAGATGCAGAAATATATTTACTTGATGATCCTTTCAGTGCAGTAGATGCTCATACTGGTACCCAGCTCTTTAAGGATTGCCTCATGGGGATTCTCAAAGACAAGACTGTGCTTTTCGTTACGCACCAAGTTGAGTTTCTTCCTGCAGCAGATCTCATTCTGGTTATGCAAAATGGAAGGATTGCACAGGCTGGAAGATTTGAAGAACTACTACAACAAAACATAGGATTTGAAGCTTTAGTTGGTGCTCATAGCCAAGCTCTAAAATCAGTTCTCACGGTTGAGAATTCAAGCCGTGAGAACGAAAATCAAGTAGCTGAAAGCGGTGGCGACGGTGCCAATGCTAATTTCAGCGTAGAGGTGGAGGATGCACAGATTGACACTGACAAAGGTCAAGAGATCAAAAGAAAAGAAGGGAAGTTGGTTCAAGATGAGGAGAGGGAAAAAGGAAGCATTTCCAAACAAGTCTATTGGTCTTTTTTGACCACTGTCAAAGGGGGAGTACTGGTTCCAATGATAATATTGGCACAATCATCATTTCAAGTACTACAAGTAGCCAGTAATTTTTGGATGGCATGGGCATGTCCGACCACAAGTGAAGCTGTGCCAAAGTTTTCAGTGAGCTTCATACTTCTAATCTATTCACTATTCTCTGTTGGAAGCTCCCTGTTCGTGCTGGTTAGAGCCGTGCTGTTGGCGATTGCAGGGCTTTGGACATCACAGAAGCTCTTCACAAACATGTTGCATAGTGTGATGCGGGCACCAATGTCATTTTTTGACTCAACTCCAGCTGGAAGAATCTTAAACAGGGCGTCCACAGACCAAAGTGTACTGGACTTGGAAATGGCATGGAAATTAGGATGGTGTGCTTTTTCAGTAATTCAGATTCTGGGTACTATTGCCGTGATGTCCCAAGTGGCTTGGGAAGTATTTGTCATCTTCATTCCTGTAACTGCAATCTGCATTTGGTATCAACGATATTATACACCAACAGCAAGGGAACTGGCACGCATATCTCAGATTCAAATAGCTCCCATTCTTCATCACTTTGCAGAATCACTAGCTGGAGCAGCACCAATTCGTGCTTTCAACCAAGAAACTCGTTTCATAGACACAAACCTTATTCTTGTGGATAACTTTTCAAGGCCATGGTTCCACAATGTGTCAGCTATGGAATGGCTTTCATTCAGATTGAATTTGCTATCTAATTTCGTTTTTGCCTTCTCATTGATAATACTGGTATCCCTCCCCGAAGGCATGATCAGTCCAAGCATTGCCGGATTGGCAGTGACATATGGAATCAATCTGAATGTTTTACAAGCTTCCGTTATATGGAACATATGCAATGCAGAAAATAAGATGATATCAGTTGAAAGAATTCTGCAGTACTCAAATTTAGCAAGTGAAGCTCCTCTTGTGATCCAGGACACTAGGCCACCAAACAATTGGCCAGAAACAGGAACTATATGCTTCAAAAACTTGCATATACGTTATGCTGAGCATCTCCCTTATGTCTTGAAAAACATTGACTGCACATTTCCTGGAAGAAAGAAAGTTGGTGTCGTAGGAAGAACAGGGAGTGGAAAATCAACTCTCATCCAGGCAATTTTCAGGGTTGTAGAACCCAGAGAAGGAACCATAATTATTGACAACGTAGATATCTGTAAAATAGGTCTGCATGACTTGCGATCAAGACTTAGCATCATTCCGCAGGATCCTTCTATGTTTGAAGGTACAGTCAGAGACAATCTAGATCCTTTGCACCAATACTCTGACACTGAAATATGGGAGGCTTTGGAGAAATGTCAACTGGGTCAGCTAGTGAGAGGAAAAGAGCAGAAGCTGGACACATCAGTTGTTGAAAATGGAGAAAATTGGAGCGTAGGCCAAAGACAGCTGTTCTGTCTTGGAAGAGCTTTACTTAAGAGAAGCAGTATTCTTGTACTTGATGAAGCAACAGCTTCAGTGGACTCTGCAACAGATGGGGTGATACAAAGAATCATTAGCCAAGAGTTCAAAGATAGAACAGTAGTCACAATCGCTCATCGGATTCATACTGTTATTGATAGTGATCTGGTGCTGGTGCTCAGTGATGGAAGAATTGCAGAATATGACACACCGACAAGATTACTTCAAAGAGAAGATTCATTCTTTTTCAAACTCATAAGGGAGTACTCATCAAGATCACATAATTTCAGCAATTTAGCAAGCCAACATGTGCAGAGCATAAGCTGA 4545 0.4147 MLWGGMSSMMTTSKFMNFQFWAACVDLMNSTCLWEHINIPVQLGFLGILLFQSLKKGKSLLCGEKDLDEQMSIYLTSVTNGLAYRASIACSSLLLAFHILMLILVCTKGETQCNDGSLAVISETMSVLSWTIALAAVYMTSKRCTRFPWILRIWWMCSFLMSILCAALHFSFIIANKCLFGLRECVEPISLLGITYLLCIAIRGRTGTMLVVQNGINDPLLGEKMEKGSKCKVKSPYGKATFLQLITFSWLNPLFSVGYKKPLELSDIPDVDINDCADFVSASFDERLEHVKQKEMSTNPSIYKAIFLFARKKALVNAVFAIVSAASSYVGPYLISDFVSFLAEKKNESLRTGYLLSLAFLCAKTVETIAQRQWIFGARQLGLRLRVALVARIYKKGLVLSSRSRQSRTSGEMVNYMSVDVQRITDFIWYVNSVWMLPVQVSLAVFILHTNLGLGSLAALAATLAVMALNIPLTRIQKRYQSKIMECKDNRMKATSEVLRNMKTLKLQAWDSQFLQGIEELRKLEYNWLWKSLMQSALSAFIFWGSPTFMSVVTFVTCYLMGIDLTAGRVLSALATFRMLQDPIFNLPDLLSVIAQGKVSADRIASFLQEEEVQADAVEYVPRDQTEFDIEISKGKFSWDPESSIPTLDGIDLKVKRGMKVAICGMVGSGKSSLLSCILGEIHKLSGNVKVSGTKAYVPQSPWILTGNIKENIIFGQEYNGDKYEKTTEACALIKDFELFSCGDLTEIGERGINMSGGQKQRIQIARAVYQDAEIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKTVLFVTHQVEFLPAADLILVMQNGRIAQAGRFEELLQQNIGFEALVGAHSQALKSVLTVENSSRENENQVAESGGDGANANFSVEVEDAQIDTDKGQEIKRKEGKLVQDEEREKGSISKQVYWSFLTTVKGGVLVPMIILAQSSFQVLQVASNFWMAWACPTTSEAVPKFSVSFILLIYSLFSVGSSLFVLVRAVLLAIAGLWTSQKLFTNMLHSVMRAPMSFFDSTPAGRILNRASTDQSVLDLEMAWKLGWCAFSVIQILGTIAVMSQVAWEVFVIFIPVTAICIWYQRYYTPTARELARISQIQIAPILHHFAESLAGAAPIRAFNQETRFIDTNLILVDNFSRPWFHNVSAMEWLSFRLNLLSNFVFAFSLIILVSLPEGMISPSIAGLAVTYGINLNVLQASVIWNICNAENKMISVERILQYSNLASEAPLVIQDTRPPNNWPETGTICFKNLHIRYAEHLPYVLKNIDCTFPGRKKVGVVGRTGSGKSTLIQAIFRVVEPREGTIIIDNVDICKIGLHDLRSRLSIIPQDPSMFEGTVRDNLDPLHQYSDTEIWEALEKCQLGQLVRGKEQKLDTSVVENGENWSVGQRQLFCLGRALLKRSSILVLDEATASVDSATDGVIQRIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDTPTRLLQREDSFFFKLIREYSSRSHNFSNLASQHVQSIS* 1515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02120 1514 Gene3D ABC transporter type 1, transmembrane domain 285 613 IPR036640 GO:0005524|GO:0016020
Pte3g02120 1514 Gene3D ABC transporter type 1, transmembrane domain 902 1240 IPR036640 GO:0005524|GO:0016020
Pte3g02120 1514 Gene3D - 628 860 IPR027417 -
Pte3g02120 1514 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 630 853 IPR003439 GO:0005524
Pte3g02120 1514 CDD ABCC_MRP_domain2 1257 1477 - -
Pte3g02120 1514 ProSitePatterns ABC transporters family signature. 755 769 IPR017871 GO:0005524|GO:0016887
Pte3g02120 1514 SUPERFAMILY ABC transporter transmembrane region 310 612 IPR036640 GO:0005524|GO:0016020
Pte3g02120 1514 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1259 1493 IPR003439 GO:0005524
Pte3g02120 1514 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 623 850 IPR027417 -
Pte3g02120 1514 Pfam ABC transporter 648 782 IPR003439 GO:0005524
Pte3g02120 1514 SMART AAA_5 657 830 IPR003593 GO:0016887
Pte3g02120 1514 SMART AAA_5 1285 1478 IPR003593 GO:0016887
Pte3g02120 1514 FunFam ABC transporter C family member 5 903 1240 - -
Pte3g02120 1514 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 239 1496 - -
Pte3g02120 1514 FunFam ABC transporter C family member 10 298 612 - -
Pte3g02120 1514 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 318 596 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte3g02120 1514 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 943 1222 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte3g02120 1514 CDD ABCC_MRP_domain1 630 830 - -
Pte3g02120 1514 SUPERFAMILY ABC transporter transmembrane region 944 1235 IPR036640 GO:0005524|GO:0016020
Pte3g02120 1514 Pfam ABC transporter transmembrane region 951 1186 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte3g02120 1514 Pfam ABC transporter transmembrane region 317 583 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte3g02120 1514 FunFam ABC transporter C family member 5 615 862 - -
Pte3g02120 1514 Pfam ABC transporter 1276 1424 IPR003439 GO:0005524
Pte3g02120 1514 Gene3D - 1242 1494 IPR027417 -
Pte3g02120 1514 CDD ABC_6TM_ABCC_D1 316 604 IPR044746 GO:0140359
Pte3g02120 1514 CDD ABC_6TM_ABCC_D2 940 1234 IPR044726 GO:0140359
Pte3g02120 1514 FunFam ABC transporter C family member 3 1242 1494 - -
Pte3g02120 1514 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1250 1488 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g02120 Pte-Chr3 36682209 36689912 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02120 609 844 Calmodulin-binding Proteins AT2G36910 30.435 1.96e-25 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g02120 - - gmx:100809749 2219.12