Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02115 ATGTCTGGGTCCAATAGCATTTCAGATTTGGATGACTTTGCTGTTTTAGATTCAATCACCCAATACCTTCTCAGTGATAAAACATTTGGTGACATTCCTATGCTATTTCAGACAATCTCACCTAGCATTGATTCCATGAATTGCGCAGCAACTACTGCAAGCTCTTCAGAAAGTTGTGTGCATGGCAATGGTACAGTAGCGGTAAACAATAATACCAGTGACAGTGCGCAATACCAATCAGCTCAATGTTTGGTGGCGCGTGAGGCTTATACGCCGAGGATATACCGGAGTTATAGGGGTGTGAGACGTAGGCCATGGGGAAAATATGCGGCGGAGATTAGAGATCCGGCGAAGAATGGAGCTAGGGTTTGGCTGGGGACATACGAAACTGCTGAACTTGCTGCATTCGCTTATGACAAAGCTGCATTCAAGCTACGTGGGGCAAAGGCTAAGCTTAACTTCCCTCACCTTGTCGGCTCTGATGTGCCTGAGCTAAATAGGGTGACACGAAAGCATTCACGATCACTACAATTCCCAGATATACCCATATGA 552 0.4583 MSGSNSISDLDDFAVLDSITQYLLSDKTFGDIPMLFQTISPSIDSMNCAATTASSSESCVHGNGTVAVNNNTSDSAQYQSAQCLVAREAYTPRIYRSYRGVRRRPWGKYAAEIRDPAKNGARVWLGTYETAELAAFAYDKAAFKLRGAKAKLNFPHLVGSDVPELNRVTRKHSRSLQFPDIPI* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02115 183 CDD AP2 98 157 IPR001471 GO:0003700|GO:0006355
Pte3g02115 183 SUPERFAMILY DNA-binding domain 98 156 IPR016177 GO:0003677
Pte3g02115 183 Gene3D AP2/ERF domain 97 157 IPR036955 GO:0003700|GO:0006355
Pte3g02115 183 ProSiteProfiles AP2/ERF domain profile. 97 155 IPR001471 GO:0003700|GO:0006355
Pte3g02115 183 SMART rav1_2 97 161 IPR001471 GO:0003700|GO:0006355
Pte3g02115 183 FunFam Ethylene-responsive transcription factor 2 96 156 - -
Pte3g02115 183 Pfam AP2 domain 98 147 IPR001471 GO:0003700|GO:0006355
Pte3g02115 183 PANTHER DNA-BINDING DOMAIN 59 163 IPR044808 GO:0003700|GO:0009873
Pte3g02115 183 PRINTS Ethylene responsive element binding protein signature 98 109 IPR001471 GO:0003700|GO:0006355
Pte3g02115 183 PRINTS Ethylene responsive element binding protein signature 137 157 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g02115 Pte-Chr3 36393465 36394247 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02115 98 160 AP2-EREBP Transcription Factor Family AT2G44840 85.714 6.25e-36 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte3g02115 AP2 6.7e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g02115 K09286 - fve:101293051 153.295