Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02113 ATGAAAGGTGAATATCTAGAACCCCGAACCGAAGCTCCCACTATGTTTTCTAACCTTCCTCAACCTCCTCAACACCAAAATCATCATCAACAGGTTCATCAGTTCTCGAACAACCCATTCCAGCTCTTTCGAGAATATCAGAACTCCGAGGAAGATGATAGTCGTAGTAGCGGTGGTGACACCGTTACGATCACCCCGGCCCGCAAGAGTAAAAAGTCCGAACCCGTATCAACTGAAGACGAATCCTCCATTGAAGTGGTGCGGCGACCGAGAGGTCGCCCACCTGGATCCAAGAATAAGCCGAAACCGCCAGTTATTATTACTCGGAAAACTGAACCAACTATGAGTCCGTGCATTCTCGAAGTTCCTAGTGGTAGCGACGTGGTGGAAGCCATCGCACGCTTTTGTCGCCGCAAGAATATGGGTCTCTTTGTTCTTACAGGTTCGGGTACTGTAGCGAACGCCACACTCCGGCAGCCTTCTACGACGCCAGGAGCTACAGTCACCTTCCATGGGAGATTTGATATCTTATCTATCTCAGCCACGTTCCTTCCTCAGCAAACGCAGTCGTTTCCTGCAGTACCGAACTGTTTTACCATCACGCTTTGTGGGCCTCAGGGTCAGATCGTTGGGGGTTTCGTAGCTGGAGGGTTAATGGCAGCTGAGACAGTGTTTGTGATTGCTTCTTCATTCAATAACCCCTTTTACCATAGGTTGCCATCAAATGAAGAATTTAGGGCTTCTGTTTCAGGCGGCCGAGGCAGTGGGGATGGTTCGCCGCCGGTTTCAGGAGGCGGTGGTGAAAGTAGACATTTTCCAGCAGAACCTTGCGGCATGTACAGTTGTCACCTACCTTCAACTGATGTGATTTGGGCTCCAACAGCAAGAGCACCTCATCCACCTTACGGATCATGA 915 0.5005 MKGEYLEPRTEAPTMFSNLPQPPQHQNHHQQVHQFSNNPFQLFREYQNSEEDDSRSSGGDTVTITPARKSKKSEPVSTEDESSIEVVRRPRGRPPGSKNKPKPPVIITRKTEPTMSPCILEVPSGSDVVEAIARFCRRKNMGLFVLTGSGTVANATLRQPSTTPGATVTFHGRFDILSISATFLPQQTQSFPAVPNCFTITLCGPQGQIVGGFVAGGLMAAETVFVIASSFNNPFYHRLPSNEEFRASVSGGRGSGDGSPPVSGGGGESRHFPAEPCGMYSCHLPSTDVIWAPTARAPHPPYGS* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02113 304 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 50 265 IPR014476 GO:0003680
Pte3g02113 304 MobiDBLite consensus disorder prediction 247 270 - -
Pte3g02113 304 CDD DUF296 119 229 IPR005175 -
Pte3g02113 304 ProSiteProfiles PPC domain profile profile. 112 252 IPR005175 -
Pte3g02113 304 FunFam AT-hook motif nuclear-localized protein 116 250 - -
Pte3g02113 304 Gene3D - 117 249 - -
Pte3g02113 304 SUPERFAMILY AF0104/ALDC/Ptd012-like 114 243 - -
Pte3g02113 304 Pfam Plants and Prokaryotes Conserved (PCC) domain 117 233 IPR005175 -
Pte3g02113 304 MobiDBLite consensus disorder prediction 1 108 - -
Pte3g02113 304 MobiDBLite consensus disorder prediction 72 92 - -
Pte3g02113 304 MobiDBLite consensus disorder prediction 14 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g02113 Pte-Chr3 36343054 36344481 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02113 1 302 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 57.097 3.36e-99 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g02113 - - qsa:O6P43_015380 367.851