Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02102 ATGGCTTCTCCATCATCACCTATAGAAGCCACATCATCACCACGAGGTCTACCATCTTCTGTGCCTTTACCATTGCCGGCGCCGACATCCTCACGCCGCTTGCCGCCGCCTTGTTGGTCACATGATGAAACGGTTGCTCTCATCGATGCATACCGTGACAAGTGGTATTCCCTTGGTCGTGGAAACCTCAAGGCAACCCATTGGCAAGAGGTTGCAGATACTGTCACTCGTCGTTGTCCCAACGTTTCTCCGGCCAAAACCGCCGTGCAGTGCCGTCATAAGATGGAGAAACTCCGCAAGCGTTACCGAACCGAAATCCAGCGTGCGAGGTCCTTGCCAATATCGAGGTTTATCTCTTCCTGGGTTCACTTCAAGCGTATGGATACTATGGAGAAAGGTCCCTCTGCTGCGAAACCTGAGATTCATTCAGATAGTGGAGATGACAATGATGATCTCGATGAGGAGGAGGATCACGATCTTTATGAAGAGTTTAAGAATGGTAGTGCTTCAAATACAAGAAGCTTGAACAAGTTGTCTAGGAATGGAATCGGAGGGTCAGGTGGAAATAGTAGTGCTGGGTTTAGGATTAGAATTCCAACTGGGGTGAGCATAGCACAACCCGGATCTAAGTATTATGATAGGAGTGTTGATCAGAAATATAGTCCTAAAGTAAATCCAAACCCAGGGTCTAACTATGGTGGCAGTAATTTTGGTACTAGGGTTTGGAAAGAGAAGAGTGGTGTTATGTTCGGGAAGAGAGAGAAGGAGAGAGACCCCGTTGGTGAAATGGTGGCAGCAATTAAGGTATTGGGTGATGGATTTGTGAGAGTTGAGCAAATGAAGATGGAGATGGCTAGAGAGATTGAAACTACGAGGATGGACATGGAGATGAAGAGAACTGAGATGATTTTGGAGTCACAGCAGAGGATTGTGGAGGCTTTTGCCAAAGCAGTTTCGGAGAAGAAGAAGGAGGAGGCTAAGAGAATGCTCTCCCCACCAGAACCATAG 1008 0.4742 MASPSSPIEATSSPRGLPSSVPLPLPAPTSSRRLPPPCWSHDETVALIDAYRDKWYSLGRGNLKATHWQEVADTVTRRCPNVSPAKTAVQCRHKMEKLRKRYRTEIQRARSLPISRFISSWVHFKRMDTMEKGPSAAKPEIHSDSGDDNDDLDEEEDHDLYEEFKNGSASNTRSLNKLSRNGIGGSGGNSSAGFRIRIPTGVSIAQPGSKYYDRSVDQKYSPKVNPNPGSNYGGSNFGTRVWKEKSGVMFGKREKERDPVGEMVAAIKVLGDGFVRVEQMKMEMAREIETTRMDMEMKRTEMILESQQRIVEAFAKAVSEKKKEEAKRMLSPPEP* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02102 335 Gene3D - 39 104 - -
Pte3g02102 335 MobiDBLite consensus disorder prediction 146 160 - -
Pte3g02102 335 Pfam Myb/SANT-like DNA-binding domain 37 130 IPR044822 -
Pte3g02102 335 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 15 320 IPR044823 -
Pte3g02102 335 MobiDBLite consensus disorder prediction 165 188 - -
Pte3g02102 335 Coils Coil 92 112 - -
Pte3g02102 335 ProSiteProfiles Myb-like domain profile. 39 99 IPR001005 -
Pte3g02102 335 MobiDBLite consensus disorder prediction 19 33 - -
Pte3g02102 335 FunFam Trihelix transcription factor ASIL2 39 104 - -
Pte3g02102 335 SMART 118neu2 46 135 IPR006578 -
Pte3g02102 335 MobiDBLite consensus disorder prediction 131 145 - -
Pte3g02102 335 MobiDBLite consensus disorder prediction 1 18 - -
Pte3g02102 335 MobiDBLite consensus disorder prediction 131 194 - -
Pte3g02102 335 MobiDBLite consensus disorder prediction 216 238 - -
Pte3g02102 335 MobiDBLite consensus disorder prediction 1 35 - -
Pte3g02102 335 MobiDBLite consensus disorder prediction 220 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g02102 Pte-Chr3 36092647 36095142 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02102 38 130 Trihelix Transcription Factor Family AT3G14180 36.559 6.57e-15 73.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pte3g02102 Myb_DNA-bind_4 1.1e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g02102 - - qsa:O6P43_017256 469.929