Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pte3g02094 | ATGTCGTTCAATCAATCACGGTCGACTGATAAGAGCGATACCCAGTATAGAAAAACCGGACGATCCACAAACTCTAATCAGCAGCGAGGTTCCTCAGGCTCGTTTGGTAGGGGAAGCGGAGGCGGTGGACCAGCATCTTCACCGTTGATCACGTCCTCATCTTCTTCACTCTCCTCTAATAGGAGTTTTCGGAAGTCGTACAACAATGCACACGGCGGACAGACTAGGATAAACAGCCCTCCCGGGAACCCGGCCGGGTCTAGTAACTCTTCGCTTCAGCGTCCCGTGCAAAATGGTTCGCATGTACAGTCAGAATTACATGGAGCATCAGATGCATCCGTTGCAACTGCACCTGTCAAGACAAGTGAGCCATCATCAGTAGCACCAAGTAGTGCTCAAGCTGTTCAGAAAGCACCAACTTCTCAATCTACTTCCCCCTTGAGCTCTCAGCGTGCTCCTGTGAGTTCTGCTCCAGCAGCTCCACCAACTTCAAATAAAGGAGAGGTTGCTAAGACTATGACTCTTCAATTTGGATCGTTAAATGCCAGTGCAATGAATGGAATGCAGATTCCTGCTCGCACTAGTTCAGCACCTCCGAATCTTGATGAGCAGAAGCATGATCAGGCACGCCATGAATCTTATAGAACTGTTCCATCTTTTCCAATACCTGCTGTTCCCAAACATCAGCCACCACCCAAAAAAGATCCTGTGGTGGTTGAGCAACCTTATACTGGAGATACTCTTTCAGCGACAAAGGCTAAAAAGGATCAACTGGTCCCACCTGCACCTCCGGTCAACCAAATGCACAAACCTTCAGTTCATCCTATAACAGGAATGTCCATTCCCCTACCATTTCATCATTCACAGGGATCTGTGCAGTTTGGTGGACATAATCCACAGATCCAGTCACAGGGCATGTCAACAGCATCTCTTCAAATGCCCATGCCCATGCCTTTACATATGGGAAACGCTCCACAATTGCAACAACAAGTTTTTGTTCCAGGCCTTCAAGCTCATCATATGCCTCAGGGACTCATGCAAGGCCAGAACATGAATTTTACTGCTCAAATGGGTCCTCTATTAGGACATCAGTTAGGAAACATGGGTATAAGCATGCCTCCACAATATGCCCAGCAGCAGGGAGGAAAGTTTGGTGGCACGCGCAAGACTACTGTCAAGATTACCCATCCAGAGACACACGAAGTGGTGAGACTTGATAAACGGGCAGAGACAATTGATGGGGGCTCATCAGGTACCAGGACTCATGCAAATGTACCTTCTCAGTCCCAGCCTATTTCATCCTTTGGAGCTTCTCATCCTATAAGTTATTATCCTCCTAGTTCGTATGGTAACAGTTCACTGTTTTTCCCGCCTCCTAATTCTCTCCCATTAACTAGCAATCAAGTTAGTAATTCTCAGCCATCAAGATTTAATTATCAAGCAAACCATGGACATCAAAATGTTGCAATAGTAAATCCATCATCACATAATATGCTACCTGCAAATAAGACTGGTCGTCAAGCGCAAGTTGTGGTTGACCAAGTAGACCCTGAACATACTCATGATTTGCAAAATGGTATCTTATCAACTTCATCTGGAACAACTTCTGCAACCCCAAAGGCAAGTGTTAAATCTGCTGTGGATTCTTGGAAGTCAAATTCTAGCATTAGTGTTGTTGCCAAATGTGAATCTCAAATGTCCTCTGGAAGGGATTCTGAAACTTCATCAGAGCAATCTAAACATGGAAGTGATTCTGTGGTGACACAGTCATCACCTATGGAATCTGTGGCAGTGTCTATCAGTAAATCTACTGATAACCTTGCATCCAATTCTTCATTACCTTCTTCTGTGAGCGAGGAATCATTGCCAGTTCGTTCCAATAATAAAAGCATGAAGGAACCTCTTATTAGGTCTAATTCCATGAAAGATCATTATCAGAAGCAAGGTAGGAAAGGCCAGTTGCAGCAGGTTGGTGGGCAATCCCTTTCATTGTCAGGCTCACCTAGCAATGCTGGTGCAAGCGTTGTACAGAACATAGAATCCGAAAAAAGTGCTTCTACATCAGTGATCTGTGTAAGTGTATTAATTCCTCCAGAGAAACCATCAGGCACTGGTGATACTCCTGCTGATTTTACCGAAAGAGGTTCATTCAGCAGTTCATCTGAGGTTTCTGGTGCCCAAACTCATCATGATAAGTCAGAAGAGCTTTTTCTTGAGGGTGACATATCAAAATTCAATAAGCTGATGAAACGAATGGGTGATGAACAAAAAGTTCCTGCAGGTTCAAATGACATCATTAGAAGTAAGGTAGATTCAGAACATCTTTCCTCGAATCAGATTGCTGCAAAAGAAGCTGAAGATGTTTCTCAGAAGAATGCTGCTGTCAGTAATGAAGTTTCATCTTCAGAAATGGTGGAGAAGAGTCATGTTGAAGTTGTGAAAGATGATAAAGAAAAGGCTGAAGGAAACTTGGGCTTTGATACCTCTAAGACACTGGGTTATAAAGATATTGTCTCAGACAGCAAAAACAGTAATTCTGTTGGCAGCAATTCTGTTTCTGCAGATTCTGATGTTTCAAATCCGCAGACTACTTTCTCCAGTACTGTTCCCAAAGAAACTGCTGAACACTGGAAGGAAGTTGATAATGTCGGGGATGGCTTGGGTTCCCTTCCAGGGTCAAGTTTTAAGGATAAACCTATTCTAGAAGAAATTAAGGCAAAAGCTGCTTCTAAAGGGAAGAAGAAAAGAAAGGAAATACTTCAGAAAGCAGATGCCCTGGGGACAAGTACTGATCTTTATAATGCATATAAGGGCCCTGAAGAGAGGAAAGAAGACATTGAACTTTCAGATAGCAGTGAAAGCACTACCATTGCAAGTTTGAGCCAGATGCCTACTGATACTGCACAAGAAGATCCAGGGGCAACTGACAGTGGTGGACAGATGAAAGCTGAACCGGAAGATTGGGAAGATGCAGCTGAGATGTCTACACCAAAACTGAAAGTCAGAGAGGAAAATGAACAGGTTGGCGATGGAAGTGGAACTACTGCTAAAAAATACTCTAGAGATTTTCTTATGAAATTTGCAGAGCTATGTTATGATCTCCCTCAAGGTTTTGAGATTACAGCAGATATAGCTGAGGCATTGATGGGTGCTAGTGTCAGCGGTGTCCATCTTGTTGAGCGTGATTCATATCCTAGTCCTGGAAGAATTACAGATAGGCATGGTGGGGCATCACGTTTAGACCGTCGTGGTAGTGGTGTTTTTGAGGATGACAGATGGAGTAAAGCTTCAGGTCCATTTGTTACAGGGAGGGAGCGTATGGATACTGCTTTTGGAAATAATGCTGGGTTTCATTCTGCTCAAGGAGGAAATTCTGGTGTTATAAAGAACCCTCGGGCACAGAATCCCTTGCAATGCTCCGGAGGTATTCTCTCAGGACCAATTCAAGGAATGGGACCTCAGGGAGGGCGAAGGAATAGCCCAGATGCAGAGAGGTGGCAACGTGCTACTAATTTCCAGCAAAAGGGTTTGATTCCTTCTCCTCAGATGCCAATGCAGGTGATGCATAGGGCTGAGAAGAAGTATGAGGTGGGGAAGGTGGCAGGTGAGGAAGAAGTGAAGCAGAGACAACTGAAAGCTATCTTAAACAAGTTAACTCCTCAGAATTTCGAGAAGCTCTTTGAGCAGGTGAAAGCAGTTAATATTGACAATGCTGTTACTCTCAGAGGTGTGATCTCTCAGATCTTTGACAAAGCCTTGATGGAACCCACTTTCTGCGAGATGTATGCCAATTTCTGTTCCCGTTTAGCCAGTGAGTTACCTGATCTAAGTGAGGATAATGAGAAGATAACCTTCAAAAGATTGCTTCTCAACAAGTGCCAGGAAGAATTTGAAAGAGGTGAACGAGAACAAGAGGAAGCCAACAAGGCTGATGATGAGAGTGAGACTAAACTATCTGAAGAACAGAGAGAAGAGAAGAGACTCAAGGCAAGAAGGCGTATGCTGGGTAATATTCGATTAATTGGAGAGCTGTACAAGAAGAGAATGCTAACGGAGAGAATAATGCATGAGTGCATCAAGAAGTTGCTTGGTCAGTATCAGGATCCTGACGAGGAAGACCTTGAAGCTTTATGCAAACTGATGAGCACTATTGGAGAGATGATTGACCATGCCAAGGCAAAGGAACATATGGATGCTTACTTTGAGAGGATGAAACTATTATCGAACAATATGAACTTATCTTCAAGGGTTAGATTCATGTTGAAGGATGCACTTGATTTGAGAAAAAATAAGTGGCAACAAAGGAGGAAAATTGAAGGGCCAAAAAAGATTGAGGAAGTACACAGGGATGCTGCTCAAGAGAGGCAGGCTCAAGCTACTAGACTGTCTCGCGGTCCTGGAATTAATTCCTCTGCTAGAAGGGCACCAATGGATTTTGGCCCACGGTCTCCTATGATATCTCCACCTGGTGCACATTTGGGTGGATATCGTGGGTTGCCAGCTCAACCTCGTGGTTATCCGAGCCAAGATGTCCGGTCTGATGATAGACTCTCTTTTGATGGTAGGACTTTCTCTATTCCTCTAGCTCACAGACCTACAGCTGATGATTCCATCACTTTAGGCCCCCAAGGTGGTCTTGCAAGAGGGATGTCCATAAGAGGACCACCTACAATGCCAGGTGCTTCTGTTGCCGATGTACCTTTTACTCCTGGTGACTCCAGAAGAACGACTGCTGGTCTGAATGGATACAGTAATGTACCCGAACGGACACATTATGGCTCAAGAGAGGAACTCATGCCAAGATCTACTACAGAAAGACTCTCTACTGCAGCTGTCTATAGCCAGTCAAATGCTCCAGAACGTAACTTGAGTTTTGGAAGTCAAGATTTAATAAATCCAGATCGAAGTGTTGATAGATCTCTTTCTGTGCCACCCACAAGAACACAGGGGTCAAAGGCCTCTCCAAATACCTCAGAAAAGTTATGGCCTGAAGAACGCATGCGGGACATGTCCATGCAAGCTATTAAAGAGTTCTACAGTGCTAGAGATGAAAGTGAAGTTGTTCTCTGTGTCGAAGACTTGAATGCTCCAAGCTTCCATTCATCCATGGTTTCGCTTTGGGTCACTGATTCTTTTGAAAGAAAGGATATTGAAAGAGAGCTCTTGGCAAAATTACTTGTGAATCTTGCGAAGTCTCGGGATGGCATTCTCAGCCAAGTGCAGCTCATCAATGGGTTTGAATCTGTTCTAGCTACTTTGGAGGATGCTGTAAATGATGCCCCCAGAGCGCCAGAGTTTCTTGGGAACTTGTTTGCAAAAGTCATCCTGGAAAATGTGATATCATTGAAAGAGATCGGACGATTGCTGTACCAAGGGGGGGAGGAGCCTGGTCTACTCCGGGAAGCTGGCCTCGCTGGTGATGTCCTTGGGAGCACATTGGAAGCAATACGATCAGATAAGGGGGATAATGTGTTAAATGAGATCCGTACCAGCTCTAGTTTACGGTTGGAGGACTTCCGCCCCCCTGATCCGCTGGTATCCAAGAAGTTAGAGAAATTTATTTAA | 5565 | 0.4444 | MSFNQSRSTDKSDTQYRKTGRSTNSNQQRGSSGSFGRGSGGGGPASSPLITSSSSSLSSNRSFRKSYNNAHGGQTRINSPPGNPAGSSNSSLQRPVQNGSHVQSELHGASDASVATAPVKTSEPSSVAPSSAQAVQKAPTSQSTSPLSSQRAPVSSAPAAPPTSNKGEVAKTMTLQFGSLNASAMNGMQIPARTSSAPPNLDEQKHDQARHESYRTVPSFPIPAVPKHQPPPKKDPVVVEQPYTGDTLSATKAKKDQLVPPAPPVNQMHKPSVHPITGMSIPLPFHHSQGSVQFGGHNPQIQSQGMSTASLQMPMPMPLHMGNAPQLQQQVFVPGLQAHHMPQGLMQGQNMNFTAQMGPLLGHQLGNMGISMPPQYAQQQGGKFGGTRKTTVKITHPETHEVVRLDKRAETIDGGSSGTRTHANVPSQSQPISSFGASHPISYYPPSSYGNSSLFFPPPNSLPLTSNQVSNSQPSRFNYQANHGHQNVAIVNPSSHNMLPANKTGRQAQVVVDQVDPEHTHDLQNGILSTSSGTTSATPKASVKSAVDSWKSNSSISVVAKCESQMSSGRDSETSSEQSKHGSDSVVTQSSPMESVAVSISKSTDNLASNSSLPSSVSEESLPVRSNNKSMKEPLIRSNSMKDHYQKQGRKGQLQQVGGQSLSLSGSPSNAGASVVQNIESEKSASTSVICVSVLIPPEKPSGTGDTPADFTERGSFSSSSEVSGAQTHHDKSEELFLEGDISKFNKLMKRMGDEQKVPAGSNDIIRSKVDSEHLSSNQIAAKEAEDVSQKNAAVSNEVSSSEMVEKSHVEVVKDDKEKAEGNLGFDTSKTLGYKDIVSDSKNSNSVGSNSVSADSDVSNPQTTFSSTVPKETAEHWKEVDNVGDGLGSLPGSSFKDKPILEEIKAKAASKGKKKRKEILQKADALGTSTDLYNAYKGPEERKEDIELSDSSESTTIASLSQMPTDTAQEDPGATDSGGQMKAEPEDWEDAAEMSTPKLKVREENEQVGDGSGTTAKKYSRDFLMKFAELCYDLPQGFEITADIAEALMGASVSGVHLVERDSYPSPGRITDRHGGASRLDRRGSGVFEDDRWSKASGPFVTGRERMDTAFGNNAGFHSAQGGNSGVIKNPRAQNPLQCSGGILSGPIQGMGPQGGRRNSPDAERWQRATNFQQKGLIPSPQMPMQVMHRAEKKYEVGKVAGEEEVKQRQLKAILNKLTPQNFEKLFEQVKAVNIDNAVTLRGVISQIFDKALMEPTFCEMYANFCSRLASELPDLSEDNEKITFKRLLLNKCQEEFERGEREQEEANKADDESETKLSEEQREEKRLKARRRMLGNIRLIGELYKKRMLTERIMHECIKKLLGQYQDPDEEDLEALCKLMSTIGEMIDHAKAKEHMDAYFERMKLLSNNMNLSSRVRFMLKDALDLRKNKWQQRRKIEGPKKIEEVHRDAAQERQAQATRLSRGPGINSSARRAPMDFGPRSPMISPPGAHLGGYRGLPAQPRGYPSQDVRSDDRLSFDGRTFSIPLAHRPTADDSITLGPQGGLARGMSIRGPPTMPGASVADVPFTPGDSRRTTAGLNGYSNVPERTHYGSREELMPRSTTERLSTAAVYSQSNAPERNLSFGSQDLINPDRSVDRSLSVPPTRTQGSKASPNTSEKLWPEERMRDMSMQAIKEFYSARDESEVVLCVEDLNAPSFHSSMVSLWVTDSFERKDIERELLAKLLVNLAKSRDGILSQVQLINGFESVLATLEDAVNDAPRAPEFLGNLFAKVILENVISLKEIGRLLYQGGEEPGLLREAGLAGDVLGSTLEAIRSDKGDNVLNEIRTSSSLRLEDFRPPDPLVSKKLEKFI* | 1855 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pte3g02094 | 1854 | Gene3D | - | 1208 | 1444 | - | - | |
| Pte3g02094 | 1854 | MobiDBLite | consensus disorder prediction | 18 | 35 | - | - | |
| Pte3g02094 | 1854 | MobiDBLite | consensus disorder prediction | 1435 | 1455 | - | - | |
| Pte3g02094 | 1854 | MobiDBLite | consensus disorder prediction | 523 | 541 | - | - | |
| Pte3g02094 | 1854 | MobiDBLite | consensus disorder prediction | 1435 | 1514 | - | - | |
| Pte3g02094 | 1854 | SMART | if4_15 | 1208 | 1431 | IPR003890 | GO:0003723|GO:0005515 | |
| Pte3g02094 | 1854 | MobiDBLite | consensus disorder prediction | 1574 | 1588 | - | - | |
| Pte3g02094 | 1854 | MobiDBLite | consensus disorder prediction | 697 | 737 | - | - | |
| Pte3g02094 | 1854 | ProSiteProfiles | MI domain profile. | 1666 | 1790 | IPR003891 | - | |
| Pte3g02094 | 1854 | MobiDBLite | consensus disorder prediction | 951 | 974 | - | - | |
| Pte3g02094 | 1854 | MobiDBLite | consensus disorder prediction | 1568 | 1661 | - | - | |
| Pte3g02094 | 1854 | MobiDBLite | consensus disorder prediction | 982 | 997 | - | - | |
| Pte3g02094 | 1854 | MobiDBLite | consensus disorder prediction | 835 | 871 | - | - | |
| Pte3g02094 | 1854 | MobiDBLite | consensus disorder prediction | 776 | 803 | - | - | |
| Pte3g02094 | 1854 | Coils | Coil | 1290 | 1310 | - | - | |
| Pte3g02094 | 1854 | FunFam | Eukaryotic translation initiation factor 4G | 1208 | 1444 | - | - | |
| Pte3g02094 | 1854 | MobiDBLite | consensus disorder prediction | 1 | 171 | - | - | |
| Pte3g02094 | 1854 | FunFam | Eukaryotic translation initiation factor 4G | 1660 | 1853 | - | - | |
| Pte3g02094 | 1854 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA | 369 | 1854 | IPR045208 | GO:0003743 | |
| Pte3g02094 | 1854 | MobiDBLite | consensus disorder prediction | 835 | 875 | - | - | |
| Pte3g02094 | 1854 | Pfam | MIF4G domain | 1208 | 1431 | IPR003890 | GO:0003723|GO:0005515 | |
| Pte3g02094 | 1854 | SUPERFAMILY | ARM repeat | 1662 | 1852 | IPR016024 | - | |
| Pte3g02094 | 1854 | MobiDBLite | consensus disorder prediction | 709 | 726 | - | - | |
| Pte3g02094 | 1854 | MobiDBLite | consensus disorder prediction | 414 | 433 | - | - | |
| Pte3g02094 | 1854 | MobiDBLite | consensus disorder prediction | 190 | 213 | - | - | |
| Pte3g02094 | 1854 | SUPERFAMILY | ARM repeat | 1203 | 1433 | IPR016024 | - | |
| Pte3g02094 | 1854 | MobiDBLite | consensus disorder prediction | 561 | 674 | - | - | |
| Pte3g02094 | 1854 | MobiDBLite | consensus disorder prediction | 776 | 816 | - | - | |
| Pte3g02094 | 1854 | MobiDBLite | consensus disorder prediction | 934 | 997 | - | - | |
| Pte3g02094 | 1854 | MobiDBLite | consensus disorder prediction | 561 | 635 | - | - | |
| Pte3g02094 | 1854 | Gene3D | - | 1661 | 1854 | - | - | |
| Pte3g02094 | 1854 | SMART | ma3_7 | 1667 | 1781 | IPR003891 | - | |
| Pte3g02094 | 1854 | MobiDBLite | consensus disorder prediction | 522 | 541 | - | - | |
| Pte3g02094 | 1854 | MobiDBLite | consensus disorder prediction | 936 | 950 | - | - | |
| Pte3g02094 | 1854 | MobiDBLite | consensus disorder prediction | 1299 | 1323 | - | - | |
| Pte3g02094 | 1854 | MobiDBLite | consensus disorder prediction | 1603 | 1658 | - | - | |
| Pte3g02094 | 1854 | MobiDBLite | consensus disorder prediction | 45 | 171 | - | - | |
| Pte3g02094 | 1854 | MobiDBLite | consensus disorder prediction | 650 | 674 | - | - | |
| Pte3g02094 | 1854 | MobiDBLite | consensus disorder prediction | 411 | 433 | - | - | |
| Pte3g02094 | 1854 | Pfam | MA3 domain | 1672 | 1780 | IPR003891 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pte3g02094 | Pte-Chr3 | 35787216 | 35796849 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pte3g02094 | 1 | 1855 | Eukaryotic Initiation Factors Gene Family | AT3G60240 | 43.467 | 0.0 | 1243 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pte3g02094 | K03260 | - | qsa:O6P43_026879 | 1851.25 |