Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02082 ATGGCCGCAATATCCATCACCACAATAAGACCATTTCTATTGAGGAACAATTCATCGTCGCTCACCACTCAAAGAGTACAAGTTTCTCATAGAAACTCACTCAAGGTTAACGCCATTGCTAAAAAATTGGAGCCCACCAAGGTAGCTCCTCGAGGTGATAGAGTTCTAATACGTTTGGAGCAGCTGCCTGAGAAGTCAGCTGGTGGAGTTCTATTGCCCAAATCAGCAGTCAAGTTTGAGCGATATCTTTTGGGAGAGGTTCTCTCTGCGGGTTCTGAAGCAAGTGAGGTGGAGGCAGGAAAGAAGGTTATTTTCTCAGACATAAATGCATACGAGGTGGATTTGGGAACGGATGCAAAGCATTGCTTCTGTAAAGCTGGTGACTTGTTGGCTGTAGTTGAGTAG 405 0.4519 MAAISITTIRPFLLRNNSSSLTTQRVQVSHRNSLKVNAIAKKLEPTKVAPRGDRVLIRLEQLPEKSAGGVLLPKSAVKFERYLLGEVLSAGSEASEVEAGKKVIFSDINAYEVDLGTDAKHCFCKAGDLLAVVE* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02082 134 SUPERFAMILY GroES-like 47 134 IPR011032 -
Pte3g02082 134 SMART Cpn10_2 47 133 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pte3g02082 134 CDD cpn10 47 133 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pte3g02082 134 PANTHER 10 KDA HEAT SHOCK PROTEIN 46 132 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pte3g02082 134 Gene3D GroES chaperonin 42 134 IPR037124 GO:0006457
Pte3g02082 134 Pfam Chaperonin 10 Kd subunit 47 133 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pte3g02082 134 FunFam 10 kDa chaperonin 43 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g02082 Pte-Chr3 34838764 34841902 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02082 46 134 Calmodulin-binding Proteins AT5G20720 31.959 2.56e-09 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g02082 K04078 - qsa:O6P43_017151 201.445