Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02080 ATGTTCCGCAGAGCTGCAGGGCTTCTGGCCAGGCCCATTTCCTCCGTCCGGTCTCGCAAATTGTCGACAGATCTGCCAGCTACACCGGCTGCCGATGAAGACTTTGTTCAAGCCTGGAAGAAATTGATCCCAAACATTGAACCGCCTAGGACTCCTCTTTCTTTTATGAAGCCTCGTCCTCCTACACCTTCGTTGATTCCTTCTAAGCTCACTGTTAACTTTGTTCTTCCTTATGCATCTGAACTGTCCGGTAAAGAGGTTGATATGGTGATAATACCAGCAACAACTGGTCAAATGGGTGTTCTTCCTGGGCATGTTGCCACAATTGCAGAGTTGAAACCTGGTGTCCTATCTGTACATGAAGGGAATGAGACCACCAAGTATTTTGTTAGCAGTGGCTTTGCTTTCATCCATGCTAATTCTTTTGCTGATATTATTGCTGTTGAGGCTGTGCCACTTGATAGAATTGATGCAGGCTTAGTTCAGAAGGGACTTCAAGAGTTCACTCAGAAGCTGGGTACTGCTTCAACTGATCTTGAGAAAGCTGAAGCTCAAATTGGAATTGATGTGCATAGTGCTCTCAATGCTGCACTTGCAGGCTAG 603 0.461 MFRRAAGLLARPISSVRSRKLSTDLPATPAADEDFVQAWKKLIPNIEPPRTPLSFMKPRPPTPSLIPSKLTVNFVLPYASELSGKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVHEGNETTKYFVSSGFAFIHANSFADIIAVEAVPLDRIDAGLVQKGLQEFTQKLGTASTDLEKAEAQIGIDVHSALNAALAG* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02080 200 Gene3D - 158 199 - -
Pte3g02080 200 Hamap ATP synthase epsilon chain [atpC]. 68 188 IPR001469 GO:0015986|GO:0045261|GO:0046933
Pte3g02080 200 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 70 151 IPR036771 -
Pte3g02080 200 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 30 199 IPR001469 GO:0015986|GO:0045261|GO:0046933
Pte3g02080 200 FunFam ATP synthase delta 59 156 - -
Pte3g02080 200 Gene3D - 65 157 IPR036771 -
Pte3g02080 200 Coils Coil 165 185 - -
Pte3g02080 200 CDD F1-ATPase_delta 70 193 IPR001469 GO:0015986|GO:0045261|GO:0046933
Pte3g02080 200 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 70 141 IPR020546 GO:0015986
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g02080 Pte-Chr3 34769355 34772049 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02080 1 201 Primary Pumps ATPases AT5G47030 70.388 2.03e-104 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g02080 K02134 - cave:132167725 337.035