Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02075 ATGGCAATTCAAAACAATCATGAACAATCGCATCGCCGTGAACAAGTCCCTTCTTTGTTACTGGATGCTCTATACTGTGATGAAGGACAGTGGGAGGATTTGGATGAAGGAGAAGTAGAGGAAGTTTTTCATGAAGAACATGGTGTTTATATTAAGAATAATAATAACAAGTGCTATCATAACTATGAGGATAACCCTTCTCTTTTTCCTCATCTCTTGTTGGAGCAAGATTTGTTCTGGAAAGATGAGGAGTTGCTTTCTCTCTTCACCAAGGAACAGCAACAACAAGAGGATGCTCATTTCAGTGTGAATAACAACACTAGTTTAGACCCTCCTCTCTCTGCAGCTCGTTCTGAAGCTGTGCAATGGATGCTCAAAGTTAATGCCCACTATGGATTCTCTACTCTCACAGCCACATTAGCAATTAATTACTTTGATAGATTCCTTAGGAGTGTGTATTTTCAAGAGGATAAGCCATGGATGATTCAACTTGTTGCTGTCACTTGTCTCTCTTTAGCTGCTAAAGTAGAAGAGACCCAAGTGCCTCTGCTCCCAGACCTTCAAGTGGAGAGCACAAAGTTTGTTTTTGAGGCAAAGACAATTCAGAGAATGGAGTTACTGGTGCTCTCCACCCTGAAATGGAAGATGCACCCAGTGACTCCGTTGTCGTTTCTAGATCACATTGTAAGGAGTCTTGGATTGAAAAACAACATACATCGGGAGTTCCTTCACCGCTGTAAACATCTACTGCTGTCTGCACTTACTGACTCAAGATTTGTCGGTTACCTTCCTTCTGTAATAGCCACTGCAACAATGACGTACGTTATAGATCAGATTGAGGAGACAGCTGGTGTGAACTACAAGAACCAGCTTCTGGATGTCTTGAACATTAGCAAGAGAAAAGTAAATGACTGTTACAATCTCATCCTTGAGCTCTCCAAGGCCAATTATAGTTCACAATGTAACAAGAGAAATAAGCGCAGATATGAGGAAATTCCAGACAGCCCAAGTGGGGTGATTGATGCTGCCTTTAATTCTGATAGCTCCAATGATTCACGGACAGTGGAATCATTATTATATGTATCACCACAACCTCCTCTGGTCAAGAAGAGCAGAGCGCAAGAGCAGCAAATGACATTGTCACCACTTAACCGAGTCATTTTCTGA 1167 0.4173 MAIQNNHEQSHRREQVPSLLLDALYCDEGQWEDLDEGEVEEVFHEEHGVYIKNNNNKCYHNYEDNPSLFPHLLLEQDLFWKDEELLSLFTKEQQQQEDAHFSVNNNTSLDPPLSAARSEAVQWMLKVNAHYGFSTLTATLAINYFDRFLRSVYFQEDKPWMIQLVAVTCLSLAAKVEETQVPLLPDLQVESTKFVFEAKTIQRMELLVLSTLKWKMHPVTPLSFLDHIVRSLGLKNNIHREFLHRCKHLLLSALTDSRFVGYLPSVIATATMTYVIDQIEETAGVNYKNQLLDVLNISKRKVNDCYNLILELSKANYSSQCNKRNKRRYEEIPDSPSGVIDAAFNSDSSNDSRTVESLLYVSPQPPLVKKSRAQEQQMTLSPLNRVIF* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02075 388 ProSitePatterns Cyclins signature. 117 148 IPR006671 -
Pte3g02075 388 SUPERFAMILY Cyclin-like 220 329 IPR036915 -
Pte3g02075 388 Gene3D - 98 217 - -
Pte3g02075 388 FunFam CYCLIN D32 218 307 - -
Pte3g02075 388 PANTHER CYCLINS 79 318 IPR039361 -
Pte3g02075 388 SUPERFAMILY Cyclin-like 80 217 IPR036915 -
Pte3g02075 388 Pfam Cyclin, N-terminal domain 91 216 IPR006671 -
Pte3g02075 388 CDD CYCLIN_AtCycD-like_rpt2 219 309 - -
Pte3g02075 388 SMART Cyclin_C_2 219 335 IPR004367 -
Pte3g02075 388 FunFam D3-type cyclin 110 217 - -
Pte3g02075 388 CDD CYCLIN_AtCycD-like_rpt1 116 214 - -
Pte3g02075 388 Pfam Cyclin, C-terminal domain 219 327 IPR004367 -
Pte3g02075 388 Gene3D - 88 307 - -
Pte3g02075 388 SMART cyclin_7 223 311 IPR013763 -
Pte3g02075 388 SMART cyclin_7 122 210 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g02075 Pte-Chr3 34449690 34451722 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02075 1 347 Core Cell Cycle Gene Families AT4G34160 53.258 2.01e-113 334
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g02075 K14505 - qsa:O6P43_011756 494.967