Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02065 ATGGCGGCCTTGCAGATGGCGGCTGCTAAAGATGTAGGTCGGGTCAAAGGGCCATGGAGCCCCCAAGAGGATGATTTGCTGCATAGTCTTGTGAACCGTTATGGACCTCGTAATTGGTCGGCTGTGAGCAAGTCGATTCCCGGTCGCTCCGGGAAGTCTTGTAGGCTCCGATGGTGTAACCAGCTGTCCCCTGAGGTAAAGCACCGACCTTTCACCTCTGAAGAGGACGATATCATCATCAAGGCGCATTCTGAGTACGGTAATAAATGGGCAACCATTGCTAGGCTCCTCCATGGCCGTACTGACAATGCTGTCAAGAACCATTGGAACTCTACCCTCAAGAGGAAGTTCTCTTCGTTCATGGCTGAGCATAATGGCAATGTCGCCGATGAAGAATCTTCCTTAAACCCAAAGAAAAGATTTACAGTTGGCGACGGGGGTCCTGCCTCGGCAAGTCGCAGCTTCAGTCCTAGCAGTCCTTCCGGATCCGATGTAAGCGATTCGGAGTTACCCGTGCTGTCAACTTCCCACCATAAACTGATTCCACCTGTAGGGTTAACAGGTGCGGTGGTAGCACTGCCTTCACAGACGATCGTGCGACCCCCAAGTCAAAAAAACACCAACAAACCAACGACAATTCTGACGCTGGGTCTGCCTGAGACTGAGCGAACCGAGTTGCAGTTGGCGACTCGAATACCAAGTACCCAAAACACCATTCAGGCAAAAACAGCACTAATTCCATCTTGTAAGAAGTCAGTAATGGCGTCATTGGGGCCAGAGTTATTGTCTGTGATGAAGGAGATGATAAGGGAGGAGGTGCAAAGTTACATGGCCGATCAAGAAAAAAATGTTGCTGTAAGGTTCAACTGTGAAGGTTTGACAAATGCTGATGTAAAACGTATTGCATTACCAAATTCCAAAGGTTAA 927 0.4919 MAALQMAAAKDVGRVKGPWSPQEDDLLHSLVNRYGPRNWSAVSKSIPGRSGKSCRLRWCNQLSPEVKHRPFTSEEDDIIIKAHSEYGNKWATIARLLHGRTDNAVKNHWNSTLKRKFSSFMAEHNGNVADEESSLNPKKRFTVGDGGPASASRSFSPSSPSGSDVSDSELPVLSTSHHKLIPPVGLTGAVVALPSQTIVRPPSQKNTNKPTTILTLGLPETERTELQLATRIPSTQNTIQAKTALIPSCKKSVMASLGPELLSVMKEMIREEVQSYMADQEKNVAVRFNCEGLTNADVKRIALPNSKG* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02065 308 SMART sant 15 64 IPR001005 -
Pte3g02065 308 SMART sant 67 115 IPR001005 -
Pte3g02065 308 Pfam Myb-like DNA-binding domain 16 62 IPR001005 -
Pte3g02065 308 Pfam Myb-like DNA-binding domain 70 112 IPR001005 -
Pte3g02065 308 SUPERFAMILY Homeodomain-like 13 109 IPR009057 -
Pte3g02065 308 PANTHER MYB PROTEIN-RELATED 16 182 - -
Pte3g02065 308 MobiDBLite consensus disorder prediction 128 171 - -
Pte3g02065 308 Gene3D - 69 140 - -
Pte3g02065 308 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Pte3g02065 308 CDD SANT 18 60 IPR001005 -
Pte3g02065 308 MobiDBLite consensus disorder prediction 149 171 - -
Pte3g02065 308 FunFam MYB transcription factor 16 67 - -
Pte3g02065 308 Gene3D - 15 67 - -
Pte3g02065 308 CDD SANT 70 113 IPR001005 -
Pte3g02065 308 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 62 IPR017930 -
Pte3g02065 308 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Pte3g02065 308 ProSiteProfiles Myb-like domain profile. 11 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g02065 Pte-Chr3 34288501 34289684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02065 10 284 MYB Transcription Factor Family AT4G37260 48.658 2.09e-78 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte3g02065 Myb_DNA-binding 8e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g02065 K09422 - mnt:21409653 281.182