Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02027 ATGCTGCTTCAGACTCTTGTACCACTTCTAGTTATTCCTCTCATACTTTCATCTCAAGCTTTAGGCTATTCTTTTGATGATGTGAAAATATGGTGTAGCAAAACCCCACATCCTGAACCATGTGAACATTTCTTGAGCATCCATCCTCCTCCCACACCAATCAACCAAAACATAGATTTCTTCAAAATCTTAGCCACACTTACATTGGAACGTGCCCATGTGGCGCATTCAAATGTAATCTCTCTAGGGTCAAGGTGTCAGAATCCTCTTGAAAAGGCAGCATGGTCTGATTGCCTTGAGCTATATCAAAACACCATTCTCAAGCTTAATAAAACCCTAGATCCTAATTCCAAGGTCTCCCAAGTTGATGCTCAAACCTGGCTCAGCACAGCTCTGACCAACATCGAGACATGTAAGATGGGATTTTATGACCTAGGGGTTTCAGACAATGTCTTGCCTTCCAATAATGTTTCTAAGCTGATAAGCAACACATTGTCTGTTAACAAGGTTCCACTCAGTAATGAACCAAATTACAAAAAAGGATTCCCCACTTGGGTCAAGCCTGGTGACAGAAAGCTTTTGCAATCGTTGTTTTCAGCAGCTAGGGCTAATGCTGTGGTGGCTGCAGATGGTTCAGGTCGCTACAAGACCATAAAGGATGCAATCAATGCTGCATCAACACGCAAAGGTAATGCGAGATACATCATACATGTAAAGGCAGGAGTATATAACGAGCAAGTTGTGATTAAATCCAAGAACATAATGATAATTGGAGATGGTATGGGAAAGACTATCATCACAGGTAGCAAAAGTGTTGGAGGAGGTTCCACAACATTTGCTTCAGCCACTGTTGCTGCTGTTGGTGATGGATTTATTGCAAGAGACATAACAATTAGGAATACTGCTGGTCCTTCAAATCATCAAGCTGTGGCATTACGTTCTGGATCAGATCTCTCCGTGTTTTACAGGTGCAGTTTTGAAGGTTTTCAAGACACACTCTATGCTCATTCTGACAGACAATTCTACAGGGAGTGCAACATATATGGAACAGTTGATTTCATTTTCGGCAATGCTGCTGTTGTGTTTCAAAACTGTAACATATTTGCACGTAACCCGCCAAACAAAGTGAACACAGTGACAGCACAAGGCCGTATGGACCCAAACCAAAACACTGGCATCTCTATTCACAATTCTAGGATTACAGCTGCTTCAGATTTGACTAAAGTTCAAAGCTCTGTGAAGACGTATCTGGGTAGGCCATGGAAGGAGTATTCACGGACTGTGGTGATGAAAACGTACATGGATAACCTAATTGCTCCGTCTGGTTGGCTGGAATGGAATGGTAACTTTGCTTTGAGAACTTTGTATTATGGAGAATACATGAATTCTGGTCCCGGTTCTTCCACTGCAAACAGGGTCAAATGGCCAGGCTATCATGTCATTACAAATGCAGCTGAAGCTTCCAAATTCATTGTGGGGAACCTCATTGCTGGAACTTCGTGGTTGCCAAACACTGCTGTGCCATTCACTTCTGGCCTTTAG 1542 0.4254 MLLQTLVPLLVIPLILSSQALGYSFDDVKIWCSKTPHPEPCEHFLSIHPPPTPINQNIDFFKILATLTLERAHVAHSNVISLGSRCQNPLEKAAWSDCLELYQNTILKLNKTLDPNSKVSQVDAQTWLSTALTNIETCKMGFYDLGVSDNVLPSNNVSKLISNTLSVNKVPLSNEPNYKKGFPTWVKPGDRKLLQSLFSAARANAVVAADGSGRYKTIKDAINAASTRKGNARYIIHVKAGVYNEQVVIKSKNIMIIGDGMGKTIITGSKSVGGGSTTFASATVAAVGDGFIARDITIRNTAGPSNHQAVALRSGSDLSVFYRCSFEGFQDTLYAHSDRQFYRECNIYGTVDFIFGNAAVVFQNCNIFARNPPNKVNTVTAQGRMDPNQNTGISIHNSRITAASDLTKVQSSVKTYLGRPWKEYSRTVVMKTYMDNLIAPSGWLEWNGNFALRTLYYGEYMNSGPGSSTANRVKWPGYHVITNAAEASKFIVGNLIAGTSWLPNTAVPFTSGL* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02027 513 FunFam Pectinesterase 198 513 - -
Pte3g02027 513 Pfam Pectinesterase 204 498 IPR000070 GO:0030599|GO:0042545
Pte3g02027 513 ProSitePatterns Pectinesterase signature 2. 347 356 IPR033131 -
Pte3g02027 513 PANTHER PECTINESTERASE 15 503 - -
Pte3g02027 513 CDD PMEI-like_3 31 169 - -
Pte3g02027 513 Gene3D Invertase/pectin methylesterase inhibitor family protein 24 170 IPR035513 -
Pte3g02027 513 Gene3D - 198 513 IPR012334 -
Pte3g02027 513 Pfam Plant invertase/pectin methylesterase inhibitor 28 166 IPR006501 GO:0004857
Pte3g02027 513 NCBIfam pectinesterase inhibitor domain 4 170 IPR006501 GO:0004857
Pte3g02027 513 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 27 170 IPR035513 -
Pte3g02027 513 SUPERFAMILY Pectin lyase-like 199 512 IPR011050 -
Pte3g02027 513 ProSitePatterns Pectinesterase signature 1. 230 249 IPR018040 -
Pte3g02027 513 SMART PMEI_2 23 167 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g02027 Pte-Chr3 33150967 33152803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02027 6 514 Carbohydrate Esterase AT2G45220 63.796 0.0 687
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g02027 K01051 - vvi:100255703 747.658