Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02022 ATGGACGTTCGTCTCATCTCAGAATGCTTCGTAAAACCACAGTATGATTCTGCTACCGATGAGTCTAAGCTTCCAGTCCACCTGGCACCATGGGATCTTGTTCTCTTGTCTTCAAACTACATCCAGAAAGGCCTCCTATTCCAGAAGCCTTCTTCGGTGCTACAAACCAATCCACAAGATTTTATCCATAACCTCTTGCAAAGGCTCAAGCGATCTCTTTCTCTAACCCTAGTTTATTTCTACCCTCTTGCCGGTCGCTTGGTCACCGATACAAATGAAAATCCACATTTCTACTGTGTTTACGTTGACTGTAAGGACTGCTCGGGAGCGAAGTTCATTCATGCAGCGCTAGATATGACCGTATCTGATATCCTTTCACCTGTTTACGTGCCCTTAGTGGTTCGATCATTTTTTGATCTGAACGGGGCAGTTAACCATGATGGCCACGCTTTGCCTTTGCTCTCTGTTCAAGTGACTGACCTCGTGGACGGTGTCTTCATAGGCTTGACCTTGAATCATTGCCTTATGGATGGCACCTCCTTCTGGCATTTCTTCAACACATGGTCTGAGATCTTTCAACAACTAGAGAGAAACCCAAGTATCAGTGGCATGGACGATATCACCATCTCTGTCAGACCACCCAACCATAAGCGTTGGTTTCCAGATGGTTATGGACCTGCTATGAACCTTCCTTTCAAGCACCACGATGACTTCATTCGCAGATATGTGACTCCACCGCAGCTCATGGAGAGGATCTTCCATTTCTCCGCAGCATCTTTAGTAAAACTCAAAGCAAAGGCGAACGCTGAATCTAACACGACAAAAATCTCAACTTTCCAGTCTCTATCTGCAATGGTATGGAGATGCATCACCCGTGCACGAAATCTATCAGATGATCAGAAGACCAGCTGCAAGTTAGCAGTCAACAATAGAGGTAGATTAGACCCTCCTGTTCCTCCTGATTATTCCGGGAACTCGATCAATGTGCTGGCCACGGAAACAACAGCTGTAGAATTGCTTCAACGCAATCTTGGATGGGCGGCCTGGAAGGTGGCGTGCATTTTGGGAGTTCGCCCAGGTTCGAAATGTACGGAGCTCAATTCGGAATGGGGAAAGCAGCGGCTGTGCGCAGTGGTCCAGCAAACAAGTTCGATGGGAAGATATCATCTTACCCTGGACGTGAAGGAGACGGCAGCATAG 1200 0.4717 MDVRLISECFVKPQYDSATDESKLPVHLAPWDLVLLSSNYIQKGLLFQKPSSVLQTNPQDFIHNLLQRLKRSLSLTLVYFYPLAGRLVTDTNENPHFYCVYVDCKDCSGAKFIHAALDMTVSDILSPVYVPLVVRSFFDLNGAVNHDGHALPLLSVQVTDLVDGVFIGLTLNHCLMDGTSFWHFFNTWSEIFQQLERNPSISGMDDITISVRPPNHKRWFPDGYGPAMNLPFKHHDDFIRRYVTPPQLMERIFHFSAASLVKLKAKANAESNTTKISTFQSLSAMVWRCITRARNLSDDQKTSCKLAVNNRGRLDPPVPPDYSGNSINVLATETTAVELLQRNLGWAAWKVACILGVRPGSKCTELNSEWGKQRLCAVVQQTSSMGRYHLTLDVKETAA* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02022 399 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 5 383 - -
Pte3g02022 399 Gene3D - 1 225 IPR023213 -
Pte3g02022 399 Pfam Transferase family 2 354 - -
Pte3g02022 399 Gene3D - 240 396 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g02022 Pte-Chr3 33028392 33029981 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02022 67 351 Monolignol Biosynthesis Gene Families AT5G48930 30.952 7.40e-31 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g02022 - - qsa:O6P43_016045 458.373