Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g02019 ATGGCACCTGCTAATGTTCATTTCATCTCAGAATGCTTCGTAAAACCACAGTATGATTCTGTTACCGATGAGTCTAAGCTTCCACTCCATCTGGGACCATGGGATCTTGCTATCTTGTCTGCAAACTACATCCAGAAAGGCCTCCTATTCCAGAAACCTCCTTCTGTGCTACAAACCAATCCACATGATTTTATCCATGACCTCTTGCAAAGGCTCAAGCGATCTCTTTCTCTAACCTTAGTTCATTTCTACCCTCTTGCCGGTCGCTTGGTCACCGATACAAATGAAAATCCGCATTCCTACTGTATTTACGTTGACTGCAAGGATGGCCCAGGAGTGAAGTTCATTCATGCAGCGCTAGATATGACTGTATCTGATATCCTTTCACCTGTTTATGTTCCCTTAGTGGTTCGATCATTTTTTGATCTGAACGGTGCAGTCAACCATGATGGCCATTTTTTGCCCTTGCTCTCTGTTCAAGTGACTGACCTTGTGGACGGTGTCTTCATAGGCTTGACCATGAACCATTGCATTGTGGATGGCACCTCCTTCTGGCATTTCTTCAACTCGTGGTCTGAGGTCTTCCAACAACTAGAGAGAAACCCCAACATTAGTGGCATGGATGATATCACCATTTCTGTCAGACCCAACCATAAGCGTTGGTTTCCAGATGGTTATGGACCTGCTCTGAATCTTCCCTTCAAGCACCATGATGAGTTCGTTCGCAGATATGAGATTCCATCGCAGTTCATGGAGAGGTTCTTCCATTTCTCCGCAGCATCTTTAGCAAAAATCAAAGCAAAGGCGAATGCTGAATCTAACACAACCAAAATCTCAACTTTCCAGTCTCTGTCTGCATTGGTTTGGAGATGCATCACTCGTGCACGAAATCTATCAGATGATCAGAAGACCATCTACAAGTTAGCAGTCAACAATAGAGGTAAATTAGACCCTCCTCTTCCTCCTGGTTATTTCGGGAACTCGATCAATGTGCTGGCCACGGAAACAACAGCTGGAGAATTGCTTCAACACAATCTTGGATGGGCAGCCTGGAAGGTACATCTGCTTGTGTCCAACTTCAATAACCAAGCTGTCCAAAAAAAGGTTCAAGTATGGCTACAATCCCCCACGATTTTCACAGGTGACCAGAATATTACCTCCCCTCGCGTGCATTTTGGGGGCTCGCCCAGGTTCGAAATGTACAGAACTCAATTCGGAATGGGGAAAGCAGTGGCTGTGCGCAGTGGTGCGGCAAACAAGTTGGATGGGAAGATATCATCGTGCCCTGGACTTGAAGGAGACGCCAGCGTAGACCTCGAAATAACCATGTCCCCGAATGCTATGAGTGCGCTGGCATATGACGAGGAGTTCATGGCTTGTATCTCTTCTTACTAG 1395 0.4602 MAPANVHFISECFVKPQYDSVTDESKLPLHLGPWDLAILSANYIQKGLLFQKPPSVLQTNPHDFIHDLLQRLKRSLSLTLVHFYPLAGRLVTDTNENPHSYCIYVDCKDGPGVKFIHAALDMTVSDILSPVYVPLVVRSFFDLNGAVNHDGHFLPLLSVQVTDLVDGVFIGLTMNHCIVDGTSFWHFFNSWSEVFQQLERNPNISGMDDITISVRPNHKRWFPDGYGPALNLPFKHHDEFVRRYEIPSQFMERFFHFSAASLAKIKAKANAESNTTKISTFQSLSALVWRCITRARNLSDDQKTIYKLAVNNRGKLDPPLPPGYFGNSINVLATETTAGELLQHNLGWAAWKVHLLVSNFNNQAVQKKVQVWLQSPTIFTGDQNITSPRVHFGGSPRFEMYRTQFGMGKAVAVRSGAANKLDGKISSCPGLEGDASVDLEITMSPNAMSALAYDEEFMACISSY* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g02019 464 Gene3D - 3 231 IPR023213 -
Pte3g02019 464 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 458 - -
Pte3g02019 464 Gene3D - 242 454 IPR023213 -
Pte3g02019 464 Pfam Transferase family 5 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g02019 Pte-Chr3 32945374 32946768 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g02019 70 448 Monolignol Biosynthesis Gene Families AT5G48930 27.735 7.67e-35 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g02019 - - qsa:O6P43_016045 576.63