Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01993 ATGACGAAGCGTCGAACCGAAAAGACACCAAATGCAAAGGAAAACAGGAAAACTGAGCAACCGAAACCAGAGAAACACCATTCATGGACTGTTGTACGAGGCCTATTGACTTGCAGAAATCAACAATCCCAGCAGCAGGTGAAGCAACTGTCAACACAAGGCCATACGAGGCAGGAGTTAGCTCAAGGGAAGCTACAACAGGAGCTGGTGGTGGAAGAAAGCAGTAAGAAGTGCAAGAAAATGAGGTGTTCAGGTTCAATTTGTAACAACACAAAAGTCATGCACAGGCCAGAATTACCATCTCCTGATATTCACAGAAAAAGGAACTCGTTTGACACTGATAACTCCAGGAATGCTTCAAGTAGATCAATGAAAGGCCCTTTGCATGAACTCAATGGGAGTGTATCTGCTTCTTCTTCTTCTTCACTCTCTGTTTCTTCGCATTCTTCTTCTGCAGGCTCTTTCAAAAGCATGCCCTTCAGCAGATTCTCTGGTTGTTATGAGTGTAGAATGGTGGTTGACCCTGTTCTCGGTTTCACACGAGACCCTTCTCTGAGATGCAGCATTTGTTCGTGTCCTGAATGTGGTGATATCTTTATGAAAGCTGAAAATCTGGAGCTTCATCAAGCTGTTCGACATGCCGTTTCTGAATTGGGTCCGGAAGATACAAGCAAGAACATAGTGGAGATTATATTTCAATCGAGCTGGCTAAAGAAAGAAACCCCAGTCTGCAAAATCGAGCGGATCCTGAAAGTTCAGAACACCCAGAAGACAATAGGAAAATTCGAAGAATACAGAGATTCAATCAAAGCCAAAGCTAACAAGCTGCCAAAGAAACATCCACGTTGCATAGCAGACGGGAATGAACTTCTTAGGTTTCATTGTACCACCCTTGTCTGCTCGCTAGGTCTGAACGGTTCCTCCAACCTCTGCAACTCCATTCCACAATGCAATATTTGCAGCATAATCAAGAGTGGCTTCAAGGTCGTAGGGGAAAACCATGGAGGGCCGGCAGGGAAAGGGATATTGACTACCGCAACCAGTGGTAGAGCACATGATAGTGCTGGAGTGTCACCAGAAGAGAAGAGCAATAGCAAAAGGGCAATGTTAGTTTGCCGAGTTATAGCAGGGAGAGTGAAGAAACACACAGAAGGAAGCATGGAAGAGTATGATTCAATTGCCGGAGCTGCTGGGGCATACTCCAATTTGGATGAGTTGTATGTGTTTCATCCTAGAGCTATTCTGCCTTGCTTTGTTGTAATCTATACAGGTTTCTCATGA 1281 0.4465 MTKRRTEKTPNAKENRKTEQPKPEKHHSWTVVRGLLTCRNQQSQQQVKQLSTQGHTRQELAQGKLQQELVVEESSKKCKKMRCSGSICNNTKVMHRPELPSPDIHRKRNSFDTDNSRNASSRSMKGPLHELNGSVSASSSSSLSVSSHSSSAGSFKSMPFSRFSGCYECRMVVDPVLGFTRDPSLRCSICSCPECGDIFMKAENLELHQAVRHAVSELGPEDTSKNIVEIIFQSSWLKKETPVCKIERILKVQNTQKTIGKFEEYRDSIKAKANKLPKKHPRCIADGNELLRFHCTTLVCSLGLNGSSNLCNSIPQCNICSIIKSGFKVVGENHGGPAGKGILTTATSGRAHDSAGVSPEEKSNSKRAMLVCRVIAGRVKKHTEGSMEEYDSIAGAAGAYSNLDELYVFHPRAILPCFVVIYTGFS* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01993 426 Gene3D - 214 423 - -
Pte3g01993 426 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 75 422 - -
Pte3g01993 426 MobiDBLite consensus disorder prediction 1 27 - -
Pte3g01993 426 ProSitePatterns Zinc finger C2H2 type domain signature. 190 213 IPR013087 -
Pte3g01993 426 ProSiteProfiles Zinc finger C2H2 type domain profile. 190 218 IPR013087 -
Pte3g01993 426 SUPERFAMILY ADP-ribosylation 215 424 - -
Pte3g01993 426 MobiDBLite consensus disorder prediction 98 113 - -
Pte3g01993 426 MobiDBLite consensus disorder prediction 114 143 - -
Pte3g01993 426 MobiDBLite consensus disorder prediction 92 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01993 Pte-Chr3 31972565 31974036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01993 23 422 C2H2 Transcription Factor Family AT1G75710 42.824 1.51e-101 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pte3g01993 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01993 - - qsa:O6P43_015222 615.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01993 3 31972565 31974036 Pte3g01993 3 31972565 31974036 RCT