Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01982 ATGGTAAAGAAAGAGCACAAAATCAAGAACGTGCCATCAAAACAAGTGGATTCTTCATTATCAGCATCTTCACCGGGCGCTGCTTGTAATAAGAAGTACAAAGGTGTAAGGATGAGAAGCTGGGGGTCTTGGGTATCAGAGATTAGGGCACCAAATCAGAAGACAAGGATATGGTTAGGATCTTACTCAACTGCAGAAGCTGCAGCTAGAGCTTATGATGCTGCACTTCTCTGCCTTAAAGGCTCTTCTGCAAATCTCAACTTCCCAATGTCTGCCTCACATTACATTCCTCAGGATACTGTGCTGTCTCCTAAGTCCATTCAAAGAGTTGCTGCTGCGGCTGCCAACAGTTTTGTTGACAATGCCACCAGCGCATCATCTCCCCCACCTATCGTAACCCCATCTTCTTCGTCTTCGTCTTCATCACCACCACCTTCGCCATCTGAACAAATCGATGATGGTGCTTCATTCACGTCTATTTCTGAGACTCGTACTACATCTTGTGATGGGAGGACTAACTCATTGGCTATGATGGAATCATCTTGGTACAGCTTTGAGGATCTACAATCGCCAAAGTACATGGATCAAATGCTCCATGGCACTTTCTTTGACCCGCCTGTAGTTTCCGATGAACTGTATGAAGAAAGCGATTTTTCTCTATGGAGCTTCTGTTGA 675 0.4504 MVKKEHKIKNVPSKQVDSSLSASSPGAACNKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCLKGSSANLNFPMSASHYIPQDTVLSPKSIQRVAAAAANSFVDNATSASSPPPIVTPSSSSSSSSPPPSPSEQIDDGASFTSISETRTTSCDGRTNSLAMMESSWYSFEDLQSPKYMDQMLHGTFFDPPVVSDELYEESDFSLWSFC* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01982 224 MobiDBLite consensus disorder prediction 1 26 - -
Pte3g01982 224 CDD AP2 31 91 IPR001471 GO:0003700|GO:0006355
Pte3g01982 224 PRINTS Ethylene responsive element binding protein signature 33 44 IPR001471 GO:0003700|GO:0006355
Pte3g01982 224 PRINTS Ethylene responsive element binding protein signature 55 71 IPR001471 GO:0003700|GO:0006355
Pte3g01982 224 MobiDBLite consensus disorder prediction 121 171 - -
Pte3g01982 224 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 21 167 - -
Pte3g01982 224 Gene3D AP2/ERF domain 31 91 IPR036955 GO:0003700|GO:0006355
Pte3g01982 224 SMART rav1_2 32 95 IPR001471 GO:0003700|GO:0006355
Pte3g01982 224 FunFam ethylene-responsive transcription factor ERF014-like 31 91 - -
Pte3g01982 224 SUPERFAMILY DNA-binding domain 32 91 IPR016177 GO:0003677
Pte3g01982 224 ProSiteProfiles AP2/ERF domain profile. 32 89 IPR001471 GO:0003700|GO:0006355
Pte3g01982 224 Pfam AP2 domain 32 81 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01982 Pte-Chr3 31792918 31793592 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01982 33 223 AP2-EREBP Transcription Factor Family AT1G21910 49.515 5.61e-46 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte3g01982 AP2 4.5e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01982 - - qsa:O6P43_015204 270.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01982 3 31792918 31793592 Pte3g01982 3 31792918 31793592 RCT