Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01978 ATGGAGGGCAAGCAAGAAGTTGGACAAAAGTGGAAAAAAACGTTCGACGATGCAAAAGTGTATCTGCTAATGGTGATTTTGCAATTCGGCTCTGCTGGAATGTATATCATCAGCATGGCCACTCTTGATAATGGAATGAGTCGCTATGTCTTCATCGCCTACCGTAATGCCATGGCTGCCATCGCTCTTGCACCTTTCGCTCTTGTTCTTGAAAGGAAAGTCAGGCCAAAAATGACGCTACCCATCTTCTTGAAGATCGTCCTTTTGGGATTTCTAGAGATAATCCTTGATCAAGAGTTTTCTTTTCTGGGTATGATGTACACATCGGCTTCCTACACGTCTGCCATTCTGAATGCTGTACCCTCCATAACCTTTTTACTGGCTGTCATTTTTGGGATAGAACGATTACAGATAAAAAAGAGAAGGAGTCAAGCCAAGGTTTTTGGAACTGTAATAACGTTCGGAGGAGCCGTTCTGATGGCACTGTATAAAGGTCCAGTTGTTAACATATTCGGGTCATGGCATAGCAAGCACCATGAAAGCACTAGTAACACATCTACCCAACATTGGATTATGGGAACGGTTTTCCTGCTTATAGCTTGTGTGGCCTTCTCTATGTTCTACATTCTACAATCCAAGGTACTGAAGAACTATCCAGCTCCCATGTCCCTGTCCTCCTTGATATGCTTTGTGGGAACCATACAAGGTGGGGCTGTTGCGGTTGCAGTGGAGCGTCATCCTCGAGCATGGGCTATTGGTTGGGACGCTAGGCTCTTTGCTCCACTTTATTCGGGAATCGTGACCACTGGACTTTTGTTTTATGTGCAAGGCAAAGTGATGAAAACCAGAGGCCCTGTATTCGTCACTGCCTTCAACCCTCTTCGCATGGTCATAGTGGCTCTTATGGCGGTCGCCATACTTGGAGAGAAACTCTACTTCGGAAGCATTATTGGAAGCGCCATTGTTGCTATGGGACTCTATGCTGTTATGTGGGGTAAAGCCAAGGATCACCGCATAAGCTCTACAGAGGAGAGTGAATCCCAAACCACATTGCCCATAAGCATGCAACCTAAGGGCAATGAGGTGGAAGAAACGCATACACCCAAGCTGATTTCTGAGACAGACACCGCCAGTGAGAAATAA 1143 0.4584 MEGKQEVGQKWKKTFDDAKVYLLMVILQFGSAGMYIISMATLDNGMSRYVFIAYRNAMAAIALAPFALVLERKVRPKMTLPIFLKIVLLGFLEIILDQEFSFLGMMYTSASYTSAILNAVPSITFLLAVIFGIERLQIKKRRSQAKVFGTVITFGGAVLMALYKGPVVNIFGSWHSKHHESTSNTSTQHWIMGTVFLLIACVAFSMFYILQSKVLKNYPAPMSLSSLICFVGTIQGGAVAVAVERHPRAWAIGWDARLFAPLYSGIVTTGLLFYVQGKVMKTRGPVFVTAFNPLRMVIVALMAVAILGEKLYFGSIIGSAIVAMGLYAVMWGKAKDHRISSTEESESQTTLPISMQPKGNEVEETHTPKLISETDTASEK* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01978 380 SUPERFAMILY Multidrug resistance efflux transporter EmrE 54 164 - -
Pte3g01978 380 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 335 - -
Pte3g01978 380 MobiDBLite consensus disorder prediction 339 380 - -
Pte3g01978 380 Pfam EamA-like transporter family 192 330 IPR000620 GO:0016020
Pte3g01978 380 Pfam EamA-like transporter family 21 161 IPR000620 GO:0016020
Pte3g01978 380 PANTHER WAT1-RELATED PROTEIN 20 344 IPR030184 GO:0016020|GO:0022857
Pte3g01978 380 MobiDBLite consensus disorder prediction 362 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01978 Pte-Chr3 31604710 31705114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01978 10 367 Nodulin-like Gene Family AT2G37460 47.514 2.86e-119 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01978 - - rcu:8274104 437.958