Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01970 ATGGCCGATTCAAAAGTAGAAACGATTTCCAGACTAGCTCAATGGAAAATAGAGAATTTGGGTCCTTGTTCCTACAAAAGGTCTGAACCTTTTAAGGTTGGAATCTGGAACTGGCACCTGTCCATTGAGAAGAATAGGTACCTATACATTCGACTATTCCCTGAACCTTCACGGGTTTCTAAAGAACAACCTCCAATTGCTAGATTCATTCTCAGAGTCTCCAATACTGGAACTGGCCGCAGATTATACATCTCTCCGGTTCATGAGAGACTGCTTAGGACAGGTGATGACTTTGTGTGGCCAGTTGATACAACCTTCCTTGGTCGCTTTGTCATTGATGTTGAATTTCTGGATCTGAAGATCTGCCCGTTGAACGGTGGAGAAGCCAGTTCTATATGGCCCTGCGACAAAACATTGCAATCTGTTGTCGCTCAGAGCACTCTTGGATGCCTCTCTCGCATGCTTGATGAGGAAATACATGCTGATCTCACCATCAACACTGCAGATGGCACCTTGAGGGCTCATAAGGCAGTCTTATCTGCAAGTTCTCCTGTGTTCGAGAGTATGTTTCATCACAATCTCAAGGAAAAAGAATCCTCCATCATCGACATAGAAGACATGTCAACAGAATCATGCATGACACTTCTAAGTTACTTATATGGAACGATAAAACAAGAAGATTTTTGGAAGCATCGGCTTGCACTGCTTGGAGCAGCCAATAAGTACGACATATCTGTGCTAAAAGATGCTTGTGAAGAAAGTCTCTTGGAAGATCTAAACTCAGCGAATGTATTGGAAAGGCTTCAGGAAGCTTGGCTTTATCAATTGGAAAAGTTAAAGAAAGGATGCTTGACGTACTTATTTGATTTTGGGAAAGTTTATGATGTCAGAGACGATATCAATAACTTCTTCAGGGTCGCTGACAGGGAGCTGTTGCTGGAAATGTTTCAGGAAGTTCTCACAGTTTGCAAGCCAGTATAG 981 0.4261 MADSKVETISRLAQWKIENLGPCSYKRSEPFKVGIWNWHLSIEKNRYLYIRLFPEPSRVSKEQPPIARFILRVSNTGTGRRLYISPVHERLLRTGDDFVWPVDTTFLGRFVIDVEFLDLKICPLNGGEASSIWPCDKTLQSVVAQSTLGCLSRMLDEEIHADLTINTADGTLRAHKAVLSASSPVFESMFHHNLKEKESSIIDIEDMSTESCMTLLSYLYGTIKQEDFWKHRLALLGAANKYDISVLKDACEESLLEDLNSANVLERLQEAWLYQLEKLKKGCLTYLFDFGKVYDVRDDINNFFRVADRELLLEMFQEVLTVCKPV* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01970 326 ProSiteProfiles BTB domain profile. 161 220 IPR000210 GO:0005515
Pte3g01970 326 Pfam BTB/POZ domain 153 257 IPR000210 GO:0005515
Pte3g01970 326 SUPERFAMILY POZ domain 143 257 IPR011333 -
Pte3g01970 326 CDD BTB_POZ_ZBTB_KLHL-like 160 242 - -
Pte3g01970 326 SMART BTB_4 161 259 IPR000210 GO:0005515
Pte3g01970 326 PANTHER OS08G0495500 PROTEIN-RELATED 1 325 IPR044714 -
Pte3g01970 326 Gene3D Potassium Channel Kv1.1; Chain A 136 288 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01970 Pte-Chr3 31503250 31505899 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pte3g01970 BTB 9.9e-22 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01970 K10523 - qsa:O6P43_015179 584.334