Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01963 ATGGATGATCCGGAGTATACAGCGACTTCAGTTGCTCGTTTGATTGAGCAATTGCATGCCGAGAAATCATCACCACATGAAAAAGAACTTATAACTGCACGTTTGCTTGGTATTACCAAAGCAAAAAAGGATCTCAGGACTTTTGTTGGTTCGCATGCCCTTGCATTGCCATTGTTTATAAACATTCTGAGATTTGGAACTCCTTTGGCAAAAGTAAATGTTGCTGCCACACTGAGTGTACTGTGCAAGGACGAAGATTTGCGGGCAAGAGTTCTTGTAGGTGGCTGTATTCCACCATTGCTTTCCCTTTTGAAGTCTACCTCAACAGATTTACGAAAAGCGGCAGCAGAAGCAATATATGAGGTTTCCTCTTGTGGCCTTTCAGATGATCATGTAGGTAGGAAAATTTTTGTCACGGAAGGAGTGGTGTCAACCTTGTGGGATGAGCTGAAACTGAAGAAAAAGCAGGACAAACTTGTGGAAGGCTTCATCACTGGAGCATTACGAAATCTCTGTGGTGACAAAAATGCTGACTGGAAGTTGACTTTGGAGGCTGGTGACATAGATATTATTGTTGGTCTCCTGTCTTCTGGCAATACCGTTGTAATGTCTAATGCAGCCTCCTTGTTGGCACGTTTTGTGTTGGTTTTTGATGATAGCATCTCTAAAGTAATTGATTCTGGCGCAGTTCAAGCTTTGCTTCAGCTTCTTGGTCAAGAAAATGAATTTTCTGTTCGATCAAGCGCTGCTGAAGCTTTAGAAGCTCTTTCTTCGACATCAACAGCAGTTACAAAAGCAATCATGGGTGCAGTTGGTGTTCAAATCCTAATTGGAGCTATAGTTTCTCCCTCTAAAGAGTGCATGCAGAGTGATTGGGGCCAGGCTCTGCAGCAACATGCAACTCGAACTCTAGCAAATATGTACGGTGGGATGTCGGCTTTAATATTGCATCTTGGAGAACTTTCACAAGCTTCTCGCCTTGCTGCTCCAGTTACTGATATACTCGGGGCGCTTGCCTACACTTTGATCATCTTTAAACAAAACGATGGGTTTGATGATGAACTTTTTGATGCACATCAGATAGAAAATGCTCTTGCAAGGCTGTTAAAGCCTAGGGATACAAAGTTATTCCAAGACCGAGTGCTAGAAGCCATGGCTAGTCTATATGGAAACATATGTCTGTCCACGTGTCTCGACTACGCAGATGCAAAGAAGGCCCTTGTAGGCCTCATTACATTAGCTCCTGCTGATATGCAAGAGAAACTAATACTTTGTTTGACGAAGTTGTGCCGTCCTGGTGTAAGCATATGGGAGGCCATAAAAAAGAAAGAGGGCATCCAGTTACTTATGTCATTGTTGGCTTTATCCAGTGAGCAGCTCCATGAGCATGCAGTTCAATTTCTAGCAATATTGACTGACCAGGTTGATGACAGCAAGTGGGCTATTACTGCTGCTGGTGGCATACCCCCACTAGTCCAGTTGTTAGGAGCAAGATCTGAGAAAGCAAAGGATGAAGCTGCACACGTATTATGGAATTTATGCAGCGATAGTGAAGACATCCGTGCATGTGTTGAAAAAGCTGGAGCCATCCCTGCACTTTTATGTGTTCTGAAGACCGGTGGATCAATTGGGCAAGAAACTTCTGTAAGGGCAATCACAAAGCTCATCCAAACACCTGATTCTGTTACTATCAATCAGTTAATCGCATTGCTCCTTGGAGATTCTCCTACCTCGAAGACTCACATAATCAAAGTTCTAGGCCATGTGCTCACGATGGCTTCTCTTGGCGATCTTCTGCAATATGGTTCTGCTGCTAATGAAGGATTGAGATCTTTGGTACAGGTCCTCAGTTCATCAAACAACGAAACTCAAGAGTTTGCAGCTTCTATTCTAGCTGATCTTTTCAATGCGAGGCAGGATATCTTTGATAGTCTGGGAACTGGTGGCTTTGGCCCAGAGCTCTTGCGTGACAAACCTCAAGTGGCTGGAGCTCAGTTAACTCGAGCATTAGATGCTTTGTCTAGCACAGTAAAGAACAAAGATAGTAAAAGGAAAAAACATCAGATTTCAGAGGGGGATTTCAAGCCTTCTAGCCCAGGAACTACCAGAGAGAGTACAAGGAGAAGGCTTCACATCTCAGAAGGGGATCTCAAGCCCCCTAGCCCAGCCACCACCAAACACAGTACAGGGAAAAAGCCTTCAGAGGGTGATCTCAAGCCTCTAATCAAATTGGCTAAAACAGCTTCCATTGATGCTGGTGAAACTGCAGCTGATACATGGGTCAATCTTCTCTCTGATTCTTCTCTTGCTGCAGAAGCCAAGGCAGATGTTGTTTCAGCTTTAACAAGAATATTGGAAGCTACTTTGGAAGACAAAAGAAATGCTTCACGTGCAATTGTCCAATTGGTGGATCTTCTGAGACTCAATCCAGACAGAACCAGTGATGATCCTGTGTCTGGTAGACTCTTGACTCTCATTACAGAGGGAAAAAATGCAAGCGAATCACTCATGGATGGGATTTTGGATTCTCTGAAAAGATATCAATCATTAGGCCCTCAAGAATCAACTGAAGCTGCGACATCTGAGTTGTCTAGGATACCGTTCAGCAAACCTGACCATAGTAAAAGGGAAGCACCAGCAAATCCCATGAAACCACTAATAGATGTTTTGCAAAGTGGGATTAGAAGTGCTAGATACGATGCTGCAAGGGAACTTTATGAACATATTTGTTCTGAGAGCACCATAGATGCTGAATTAGCAAAGCAAGCTATCCAGCCTTTGGTTTATATGCTCGACACCGAATCAGAGAAAGAACAGGAAGTTGTTGTTATTGCCTTGTTGAAGTTGATTTCACAATGTTCATCTACAGCAGCTCTTTTAACTAAGGCCTCCGGTACTCCACTTGAAAGTCTATACAGAATATTGTCTTCTGATTCATCCTTGGAATTAAAGAGCAAGGTTGCACAGCTCTGTTGTGTTTTTTTCAGTAGCAGTAAGGTCAGAGCAAGCTCAGTGGCCTCTCGATGCATTGAGCCCCTTATATCACTAATGCAGTCTAATTCAATCTCTTCTGTGGAGTCTGGAGTTCGTGCTTTTGAGAGATTGTTAGATGATGAAAAGCAGGTGGAACTTGCAGTTGCCCACAATATCGTGGATCTCCTTGTCAGTTTGATTTCCGGGACAAACTATCAGATTCTCGAGTCTAGTATTGGTGCTCTTATAAAGTTGGGGAAAGACCGGAATCCTTGCAACATGCAGATGTTCAAAGCTGGTGTTGTCGATAAATGCCTTGAATTGCTCCGGGATGCACCTAATTCTTTGTGCTCCATGGCTGCAGAACTATTCTGCATTCTGACGAGCAGTAGTACGATCGCTGGAAGTTCTGCTGCTGCTTCAATGGTTGATCCCCTTTTCAACATTTTGTATCGTCCTAATATCAGTTTGAGGGGGCAGCAAAATGCATTGCGAGCACTTAAAAATATAATTGAGAAGCCACAAGTTCTTGATGCTTTGAAACTTAATCCTTGTCAAGTTATTGAGCGGTTGATTACATTTCTAGACTCATCCCAAGCTGGACAACAACTTGGTGGTGAACTTTTATCTGATCTTCTTGAACAGGAACATTTTCAGCAAAATTTGATTACCAAAGACGCAGTTGTTCCCCTTGTACAACTTGCAGGAATTGGAATGTTGAGTCTGCAGCAGAAAGCAATTCAAGCATTGGAAATAATATCTGCAAGCTCGCCAAAGGCCATTGCTGATGCTGGAGGTATTTTTGGGCTGACAAAGGCTATTCTCCAAGTTGACCCTCAGCCACCAGAAGCACTTCTGGAAGCTGCAGCTTTGATTTTATGTAACTTACTGCGCTTCAACCCTGAGTACTACTATGAAGTTCCTGTTCCCGTTCTCGTAAAGTTGTTGCACTCAAGATTGGAGAGCACAGTTGTAGCAGCCCTTGAAGGACTTTTTATCCACGAGAAAGCTGATCCTGCAAGTGCTGTACAGATGTCAGAAGCTGGTGCTATACATGCTCTGCTAGACCTTATGAGATTTCATCACTTTGAAGATGATTCTGGAAGATTGCTTGGAGTTTTAATCAACAATGTAAGAGTACGAGAGATGAAGATATCTCAATATGCTTTAGCTGTTTTGCCTCATTATCTGTTGGATCCAGATACCGGATCATATGGGAAGCTTCTTGCTGCTGTAATTCTCGGAAACCTCTCCCAAAACGAAGATATCGCTAGGGCCAGCCATTCCATTACTGCGTGTGGTGCACTGGTCACTTTGCTAGAAAACCAACCAACGGAAGACATGAAAATGGTAGTCATATGTGCATTGCAGAACTTTGTCATGAATAGCAAGACTAATAAGCGAGCTGTTGCAGAAGCAGGTGGCATATTGGTGGTTCAGGACCTTTTGCTATCTTCTAGTCCAGATGTTTCCATACAGGCAGCCATGCTTATCAAACTTTTGTTTACTACTCAAACATTGTATGACTTCGTTAAAGATGATCTGATCACATATTTGACAGCTGTACTTGACAGAGAAATGTGTTACACAGCTCCTATCAGTGAACTCATCTTGAAAACTTTAACCTTGATCATCACGAACTTTCCTGTAGTCCGCAGATCAAAAGCTGTGACACTGCTCATACCTCATTTCATAGATGTACTTAAATCTGGGATTGAAAGCGCTCAGGATACTGTACTTGACGCCTTATGCTTGCTTAAGATAACTTGGTCAAAAATGCCAAAAGATGTAGCAAAGACACAGGCTATGGCTGTATCAGAAGCCATTCCTATTCTGCAAACGATGGTAATGGGATCCTGCCCGCCTACTTTCAGAGAGAGGGCATACAGCCTTTTACATAGTTTGCCGGGCTGTTTGACTATTACTGTCAAGCATGGGAGTAACCTTAAGCAATCTGGGGGAAGTGTCAATGCCTATTGCCAACTGAGAATAGGCAAGGGTCTGCGAAGAAAAACAAAGGTGGTAAGTGGTAGTAAGTCTCACAAGTGGGAAGAAACTCTTACGTGGGTGTTTGATGCAGCTCCAAAGGGACATAACCTACAAATTGTTTGCAAAAACAAGGTTCTTTTAAGGAAGTCAACACTGGGAAAAGTGAACATCCAAACTGACAGAGTTTTTGGTGAGGGAGTCTGCGGTGGATCGTTCACGCTTGATCACCCTAACAGCAAGAAAGATGGCTCTTTGGGGACACTGGAAATTGAGATGGCCTGGTCCAACATGGTGCCAGATTCCAATGTCGATGCCTTGTAA 5283 0.4321 MDDPEYTATSVARLIEQLHAEKSSPHEKELITARLLGITKAKKDLRTFVGSHALALPLFINILRFGTPLAKVNVAATLSVLCKDEDLRARVLVGGCIPPLLSLLKSTSTDLRKAAAEAIYEVSSCGLSDDHVGRKIFVTEGVVSTLWDELKLKKKQDKLVEGFITGALRNLCGDKNADWKLTLEAGDIDIIVGLLSSGNTVVMSNAASLLARFVLVFDDSISKVIDSGAVQALLQLLGQENEFSVRSSAAEALEALSSTSTAVTKAIMGAVGVQILIGAIVSPSKECMQSDWGQALQQHATRTLANMYGGMSALILHLGELSQASRLAAPVTDILGALAYTLIIFKQNDGFDDELFDAHQIENALARLLKPRDTKLFQDRVLEAMASLYGNICLSTCLDYADAKKALVGLITLAPADMQEKLILCLTKLCRPGVSIWEAIKKKEGIQLLMSLLALSSEQLHEHAVQFLAILTDQVDDSKWAITAAGGIPPLVQLLGARSEKAKDEAAHVLWNLCSDSEDIRACVEKAGAIPALLCVLKTGGSIGQETSVRAITKLIQTPDSVTINQLIALLLGDSPTSKTHIIKVLGHVLTMASLGDLLQYGSAANEGLRSLVQVLSSSNNETQEFAASILADLFNARQDIFDSLGTGGFGPELLRDKPQVAGAQLTRALDALSSTVKNKDSKRKKHQISEGDFKPSSPGTTRESTRRRLHISEGDLKPPSPATTKHSTGKKPSEGDLKPLIKLAKTASIDAGETAADTWVNLLSDSSLAAEAKADVVSALTRILEATLEDKRNASRAIVQLVDLLRLNPDRTSDDPVSGRLLTLITEGKNASESLMDGILDSLKRYQSLGPQESTEAATSELSRIPFSKPDHSKREAPANPMKPLIDVLQSGIRSARYDAARELYEHICSESTIDAELAKQAIQPLVYMLDTESEKEQEVVVIALLKLISQCSSTAALLTKASGTPLESLYRILSSDSSLELKSKVAQLCCVFFSSSKVRASSVASRCIEPLISLMQSNSISSVESGVRAFERLLDDEKQVELAVAHNIVDLLVSLISGTNYQILESSIGALIKLGKDRNPCNMQMFKAGVVDKCLELLRDAPNSLCSMAAELFCILTSSSTIAGSSAAASMVDPLFNILYRPNISLRGQQNALRALKNIIEKPQVLDALKLNPCQVIERLITFLDSSQAGQQLGGELLSDLLEQEHFQQNLITKDAVVPLVQLAGIGMLSLQQKAIQALEIISASSPKAIADAGGIFGLTKAILQVDPQPPEALLEAAALILCNLLRFNPEYYYEVPVPVLVKLLHSRLESTVVAALEGLFIHEKADPASAVQMSEAGAIHALLDLMRFHHFEDDSGRLLGVLINNVRVREMKISQYALAVLPHYLLDPDTGSYGKLLAAVILGNLSQNEDIARASHSITACGALVTLLENQPTEDMKMVVICALQNFVMNSKTNKRAVAEAGGILVVQDLLLSSSPDVSIQAAMLIKLLFTTQTLYDFVKDDLITYLTAVLDREMCYTAPISELILKTLTLIITNFPVVRRSKAVTLLIPHFIDVLKSGIESAQDTVLDALCLLKITWSKMPKDVAKTQAMAVSEAIPILQTMVMGSCPPTFRERAYSLLHSLPGCLTITVKHGSNLKQSGGSVNAYCQLRIGKGLRRKTKVVSGSKSHKWEETLTWVFDAAPKGHNLQIVCKNKVLLRKSTLGKVNIQTDRVFGEGVCGGSFTLDHPNSKKDGSLGTLEIEMAWSNMVPDSNVDAL* 1761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01963 1760 SUPERFAMILY ARM repeat 1193 1624 IPR016024 -
Pte3g01963 1760 Gene3D - 1228 1626 IPR011989 -
Pte3g01963 1760 Gene3D - 289 594 IPR011989 -
Pte3g01963 1760 Gene3D - 967 1196 IPR011989 -
Pte3g01963 1760 MobiDBLite consensus disorder prediction 851 880 - -
Pte3g01963 1760 MobiDBLite consensus disorder prediction 675 739 - -
Pte3g01963 1760 Gene3D - 7 287 IPR011989 -
Pte3g01963 1760 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 1 696 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Pte3g01963 1760 CDD C2 1630 1720 - -
Pte3g01963 1760 Gene3D - 595 966 IPR011989 -
Pte3g01963 1760 SMART C2_3c 1629 1725 IPR000008 -
Pte3g01963 1760 SUPERFAMILY ARM repeat 93 1322 IPR016024 -
Pte3g01963 1760 Pfam C2 domain 1629 1726 IPR000008 -
Pte3g01963 1760 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 486 528 IPR000225 GO:0005515
Pte3g01963 1760 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1628 1748 IPR035892 -
Pte3g01963 1760 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 228 272 IPR000225 GO:0005515
Pte3g01963 1760 Pfam Armadillo/beta-catenin-like repeat 479 515 IPR000225 GO:0005515
Pte3g01963 1760 SMART arm_5 1453 1494 IPR000225 GO:0005515
Pte3g01963 1760 SMART arm_5 997 1037 IPR000225 GO:0005515
Pte3g01963 1760 SMART arm_5 1205 1246 IPR000225 GO:0005515
Pte3g01963 1760 SMART arm_5 1080 1120 IPR000225 GO:0005515
Pte3g01963 1760 SMART arm_5 1038 1078 IPR000225 GO:0005515
Pte3g01963 1760 SMART arm_5 910 951 IPR000225 GO:0005515
Pte3g01963 1760 SMART arm_5 517 557 IPR000225 GO:0005515
Pte3g01963 1760 SMART arm_5 765 804 IPR000225 GO:0005515
Pte3g01963 1760 SMART arm_5 475 515 IPR000225 GO:0005515
Pte3g01963 1760 SMART arm_5 83 124 IPR000225 GO:0005515
Pte3g01963 1760 SMART arm_5 433 473 IPR000225 GO:0005515
Pte3g01963 1760 SMART arm_5 217 258 IPR000225 GO:0005515
Pte3g01963 1760 SMART arm_5 1121 1163 IPR000225 GO:0005515
Pte3g01963 1760 Gene3D C2 domain 1627 1757 IPR035892 -
Pte3g01963 1760 ProSiteProfiles C2 domain profile. 1607 1726 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01963 Pte-Chr3 31408424 31414627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01963 407 705 U-box Gene Family AT3G46510 25.559 1.28e-07 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01963 - - cave:132183675 1041.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01963 3 31408424 31414627 Pte3g01963 3 31408424 31414627 RCT