Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01958 ATGGAAAGTCTGCAGCAGCAGCAGCAGCAGCAGGGGGCAGATACAGTCTCATCGTCGTGGAGGAAAGGCAGCAACCGCATAGTGGCCATCCATGTTGAAGGAGAGATCACGCCGCCCCATACCTTTAGCCTCGATCAACAAACTACTGCTCATGACGAGGTGAAGAAACCAGGATGGAGAAAGTTTACAGCTATTGTAGGACCGGGTTTCCTTGTTTCTATGGCGTATATAGATCCTGGAAGCATGGAAACTGACCTCCAAACCGGAGCAACCCACAGATATCAGCTGCTGTGGATCATAACCATGGGGATGGTGTTTGCGCTTATCATTCAGTCTCTTGCTGCCAATCTTGGTGTAACGACTGGCAAACATCTTGCAGAAATCTATAGGGCTGAGTACCCAAAATATGTCAAGTATGGATTATGGTTGACGGCTGAAATAGTGCTAACCAAAGCAGATGTTGCAGTGATTGGAAGCGCGTTTGCTTTGAATATTCTCTTCAAGATCCCACTTTGGATTGGAGTTCTGTTGACAGGGTGCAGCACTCTGTTGCTTCTTGGCATACAGAGATATGGGGTTAGGAAGCTGGAATTTCTCATCACAGCAATGATTTTAACAATGGCCGGATGTTTCTTTGGGGAGATGAGTTATGTGAAGCCTCCTGCTTCCGATTTATTCAAGGGCATGTTTGTGCCGAAGATCACTGGTACAAGTGCTGCTGGTGATGCAGTTTCAAATATTGGTTCAATCATCATGCCGCACAACCTCTTCCTCCACTCTGCCCTTGTGCTTTCAAGGAAAGCACCAGCTTCAGTTCATGGCATAAATGATACACGTAGATACTTCTTGATCGAGACAGCCTTTGCTCTATTTGTGGCTTTCTTAATCAACGTTTCCTTAACCTCTGTAACTGCTACTGTTTGCTTTGCTGACAACCTTTCCAGTGACAATGCAGAACGATGCAACAACCTGACGCTGAATTCCGCTTCTTTCCTTCTGGAGAATGTGTTGGGAAGGTCTGCTAAATACGTTTATGGCATTGCGCTACTTGCTTCGGGTCAAAGCTCTGCTATCACAGGCACATATGCAGGACAATACATCATGCAGGGCTTTCTGGACATTAAGATGACAAAATGGAAAAGGAACTTAATGACTAGGACTATTGCCATGACACCCAGCCTTCTAGTAGCCATCATTGGAGGATCATCAGCTTCTGGAAACCTCATTATCGTTACAAATATGGTGATTGCATTTGGGTCACCTTTCACTATAATTCCACTTCTCAGGTTCAGCTACAGCAGTCGCAAAATGGGAGCTCATAAGAATTCTATAGTTATCATTGCCATCTCATGGATTGTGAGCTGCGGAATCATTGGGATCAATTTATATTTTCTCAGTACTACCTTTGTCCGTTGGTTAATCCACAACAGTCTACCAAAGGTTGCAAACGTGTTCATCGGAATCATAGTGTTCCCTCTAATGACTTTCTATGGACTTGTGATTATCTATCTAACTTTCCGGAAAGACAAGGCTGTTATTAATCGAATGGGAGAGGATCAAGGATGGCAAACTCAATTGGAAATGGGAAATGGTGGTGGCAGACAAGTTGAAGAGGAATCTGCACCTTAA 1629 0.4451 MESLQQQQQQQGADTVSSSWRKGSNRIVAIHVEGEITPPHTFSLDQQTTAHDEVKKPGWRKFTAIVGPGFLVSMAYIDPGSMETDLQTGATHRYQLLWIITMGMVFALIIQSLAANLGVTTGKHLAEIYRAEYPKYVKYGLWLTAEIVLTKADVAVIGSAFALNILFKIPLWIGVLLTGCSTLLLLGIQRYGVRKLEFLITAMILTMAGCFFGEMSYVKPPASDLFKGMFVPKITGTSAAGDAVSNIGSIIMPHNLFLHSALVLSRKAPASVHGINDTRRYFLIETAFALFVAFLINVSLTSVTATVCFADNLSSDNAERCNNLTLNSASFLLENVLGRSAKYVYGIALLASGQSSAITGTYAGQYIMQGFLDIKMTKWKRNLMTRTIAMTPSLLVAIIGGSSASGNLIIVTNMVIAFGSPFTIIPLLRFSYSSRKMGAHKNSIVIIAISWIVSCGIIGINLYFLSTTFVRWLIHNSLPKVANVFIGIIVFPLMTFYGLVIIYLTFRKDKAVINRMGEDQGWQTQLEMGNGGGRQVEEESAP* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01958 542 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 36 511 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte3g01958 542 MobiDBLite consensus disorder prediction 1 20 - -
Pte3g01958 542 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 60 434 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte3g01958 542 NCBIfam Nramp family divalent metal transporter 67 430 - -
Pte3g01958 542 Pfam Natural resistance-associated macrophage protein 83 443 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte3g01958 542 PRINTS Natural resistance-associated macrophage protein signature 243 266 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte3g01958 542 PRINTS Natural resistance-associated macrophage protein signature 381 398 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte3g01958 542 PRINTS Natural resistance-associated macrophage protein signature 353 372 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte3g01958 542 PRINTS Natural resistance-associated macrophage protein signature 168 187 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte3g01958 542 PRINTS Natural resistance-associated macrophage protein signature 193 214 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte3g01958 542 PRINTS Natural resistance-associated macrophage protein signature 413 432 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte3g01958 542 PRINTS Natural resistance-associated macrophage protein signature 140 166 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01958 Pte-Chr3 31348454 31352726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01958 55 510 Inorganic Solute Cotransporters AT1G15960 55.142 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01958 K21398 - qsu:112038292 676.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01958 3 31348454 31352726 Pte3g01958 3 31348454 31352726 RCT