Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01957 ATGTCGAACCAGAATCGTCGTCCACCGTCGTATTCATTCACAACGTCTTCATCTTTGGCAAAGCGTCATGCTTCATCTGAAAACTTCGGAAAGCCCATGCCTCCCTCTTCTCATATGGCCAAGAAACGTGCACCTCTTGGCAACATCACGAATCACAAGAATGTTGCTCCCAGTATTGCTTCAAGGACCTCGCTTGTTTCCTCCTCTGCTGCTTTGGTGCAATGTGCGACTAAAATAGCTAAGGCAAATAAGGTTGGCCCTGCATATGCTACTACTACCACAGGGAACTCCAGCAAAATCTTGCCTACACCATTGAACGTCAACTCTAACTCAGCTGTGCATCCGAAGGCAGCTACTATTTTATTATCTGATGGAATTGTTCCTCGGATTGCTGTACCTGCCTCAAGCAGCTGGGATACTTCGCCTAGTAAATCAGATGCGATGTCAGTTTCTATGGATGAGACCATGTCTAGCTGTAATTCTCTCAAGAGTCCTGAAGTTGAATACGTGGACAAAACTGATATTGTATCTCTTGACTCAAGTGATAGAAAGACATTCAACAATTTGAATATTTCAGATAATTCTGAAACAACAGGAAATGTATGCAGTAGAGACATTCTTATCGAGATGGAAATTGACAACAAGACTGTAAATGTGGATAGCAACTACAAGGACCCCCAATTCTGCGCTACTTACGCTTGTGATATCTACAAGCACTTGCGCGCTTCAGAGGCAAAGAAAAGGCCAGCCGTAAATTACATGGAAAGAGTTCAGAAGGACATAAATACTAGCATGCGGGCAATACTAATTGACTGGCTTGTAGAGGTAGCTGAAGAATATCGGCTTGTTCCTGATACATTGTATTTGACAGTGAACTACATAGATAGGTATCTTTCAGGGAATGCCACGAATCGTCAAAGTTTGCAACTGCTCGGTGTGGCCTGCATGATGATTGCCTCAAAATATGAAGAGATTTGTGCACCTCAGGTGGAGGAGTTCTGTTACATAACGGATAACACATATTTCAAGGATGAGGTTTTACAAATGGAGTCTTCTGTTTTGAATTATCTGAAATTTGAAATGACAGCTCCTACAGTTAAATGCTTCTTAAGAAGGTTCACTCGTGCAGCTCAAGGCATCAATGAGGTTCCATCACTGCAACTCGAATGCTTGACCAACTACATTGCAGAACTATCTCTATTGGAGTACAGCATGCTTTCTTATGCTCCATCTCTCATTGCTGCTTCGGCAATTTTCTTGGCCAAATTCATCCTCTATCCTTCAAAGAGACCTTGGTACAAGTACGTGGCCAAGAAGTACTGCCCTCCTTCAATACCCCCAGAATATTTCAGGAATTGA 1359 0.4268 MSNQNRRPPSYSFTTSSSLAKRHASSENFGKPMPPSSHMAKKRAPLGNITNHKNVAPSIASRTSLVSSSAALVQCATKIAKANKVGPAYATTTTGNSSKILPTPLNVNSNSAVHPKAATILLSDGIVPRIAVPASSSWDTSPSKSDAMSVSMDETMSSCNSLKSPEVEYVDKTDIVSLDSSDRKTFNNLNISDNSETTGNVCSRDILIEMEIDNKTVNVDSNYKDPQFCATYACDIYKHLRASEAKKRPAVNYMERVQKDINTSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNATNRQSLQLLGVACMMIASKYEEICAPQVEEFCYITDNTYFKDEVLQMESSVLNYLKFEMTAPTVKCFLRRFTRAAQGINEVPSLQLECLTNYIAELSLLEYSMLSYAPSLIAASAIFLAKFILYPSKRPWYKYVAKKYCPPSIPPEYFRN* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01957 452 Gene3D - 249 362 - -
Pte3g01957 452 MobiDBLite consensus disorder prediction 1 42 - -
Pte3g01957 452 SUPERFAMILY Cyclin-like 224 361 IPR036915 -
Pte3g01957 452 ProSitePatterns Cyclins signature. 266 297 IPR006671 -
Pte3g01957 452 SMART Cyclin_C_2 364 448 IPR004367 -
Pte3g01957 452 SMART cyclin_7 368 451 IPR013763 -
Pte3g01957 452 SMART cyclin_7 271 355 IPR013763 -
Pte3g01957 452 Gene3D - 235 435 - -
Pte3g01957 452 Pfam Cyclin, C-terminal domain 364 433 IPR004367 -
Pte3g01957 452 MobiDBLite consensus disorder prediction 1 24 - -
Pte3g01957 452 Pfam Cyclin, N-terminal domain 235 361 IPR006671 -
Pte3g01957 452 PIRSF Cyclin_A_B_D_E 1 442 IPR046965 GO:0016538|GO:0044772
Pte3g01957 452 FunFam Cyclin superfamily protein, putative 361 433 - -
Pte3g01957 452 FunFam G2/mitotic-specific cyclin 249 360 - -
Pte3g01957 452 SUPERFAMILY Cyclin-like 364 436 IPR036915 -
Pte3g01957 452 CDD CYCLIN_AtCycA_like_rpt1 225 360 - -
Pte3g01957 452 PANTHER CYCLINS 182 423 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01957 Pte-Chr3 31325243 31328753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01957 1 452 Core Cell Cycle Gene Families AT1G44110 56.262 6.88e-177 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01957 K06627 - qsa:O6P43_019780 598.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01957 3 31325243 31328753 Pte3g01957 3 31325243 31328753 RCT