Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01947 ATGCTGCTCACAAAGGTCAGTGCATCAATCTTGCTGATTGTTTCAGTCATGGTTACAGCAGCATCAACTCAAGCCCTGCAGGGATGCCCCAATAAATGTGGAGAGGTGGAGATTTCATATCCTTTTGGAATAGGTAAAGAGTGCCAACTGAATGAAGATTTCAATGTCAATTGTGATTTCACTACCGGAACCCCGATGCTCGGCGGGATTCCTTTCATAAACATATCCATAGCCGAAGGTCAAGTGTGTATAAGAATGTTTGTGGCAAATGATTGTTACAATGAGACAGGTATTCAAGTGCAGCAAAACTCACCCTGGCTTAGAACCTCAACGTTCACCATCTCGAATACCAAAAATAAATTCATAGCTGTTGGCTGCGACACTTCCGGGACTGTTATCGGTTACCACAACTCTAGAAGGTATGAGATTGGCTGCTCAAGTGTATGTGAAAGCATTGATCCTCAAGAAATTGATGGTACCTGTAGTGGTGTTGGCTGTTGCGAAGTTGATATTCCTAGTGGATGGGAGAATATTACTGTGGTTGCTAAGAGCTTTAACGCTCACAAGGATGTTTATCACTTCAATCCATGCAGCTTTGCTTTTGTTGGTGAAGGATCGAGGTTTCAATTCTCAGCTGATTCTCTGCTTAGTCTGCCTGCACAACTGCCACTGGTGCTTGATTGGGCGATTGGCAATGAAACATGTGAATCAACTTCAGGCAACATATGCAAAGGCAACAGCAAATGTGTTGATCTTGAAACAAGGTCTGGCTACCTTTGCAAATGCAGTGATGGTTTCGAAGGAAACCCTTATCACCCTGACGGTTGCCTAGACATTGACGAATGTAAAGATGGAAAACTCAACAACTGCATACACAAAGACATGTGCCAGAATACCATTGGTAATTATACTTGTGGTTGCCCCATTGGGTTAGAGGGTGATGGTAGAGAAAATGGAACCAGATGTCAACTGCAAGCTGCACAAAGAAATAAGAACAAGTCACATGTTATACATGCTACTGTTGGTGCTAGTGTAGCTTTTGTAGCATTGGTTGTCAGTATCTCTTGGTTATGCTTAATGCTTCAGAAGAGGAAGCTTATCAAACTTAAACAAAGGTTCTTTCGTCAAAATGGTGGTCTAATTCTGAAACAGCAATTACACAAACGCGAGGGATCCCCAGATACAGCCAAAATCTTTACATCTGAAGAACTAAAGAAGGCCACCAACAACTATGATGAAAATTTAATCATTGGAACAGGAGGATTTGGAACTGTTTTCAAAGGAACTTTGGAAGATAATAAGATTGTGGCAATCAAGAAATCGAAAATTGTCGATCAGAGCCAAATCGGACAATTCATCAATGAGGTTGTTGTACTCTCCCAAATAAACCACAGGAATGTCGTCAAACTCTTAGGATGTTGTTTAGAGACAGAAGTTCCGCTATTAGTCTATGAATTCGTCAACAATGGTACCCTCCATGATTACATTCATAATGAAGGCAAGTTATCTGCAATCTCTTTGACCACACGTTTGAGGATAGCAGCAGAAGCAGCCGGAGCATTAGCCTATCTGCATTCTGCAGCTACGGTACCTATCATCCACAGAGATGTCAAGACTGCAAACATTCTCCTAGATGATTGTTACATCGCCAAAGTAGCTGACTTTGGAGCTTCAAGGCTAGTTCCGATTGATCAAACGGAATTGGCCACAATGGTGCAAGGTACACTAGGATATTTAGACCCGGAGTACATGCTTACTAGTCAATTGACTGAGAAAAGTGATGTTTATAGTTTCGGTGTGGTCTTGTTAGAACTGTTAACGCGAATGAAGCCACTTTCATTTGATAGGCCACAAGAAAACAGGAGTCTAGCAAAGTACTTTCTTATCTGCTTCAAGGAGGATCGTTTGTTTGAAATTCTCGATAGTGGAGTAGTAAATGAAGGAAATATGCAGCTCGTGAGAGAAGTGGCAATTCTTGCTGCAAAGTGCTTGAGAGTTAAAGGGGATGAGAGGCCTGGTATGAAGGAGGTCGCAATGGAATTAGAAGGAATGTTAAGAATGATTGAGGAACATCCATGGGTTACTGTCAATCTCAATCAGGACGAAGGTTTACATTTGCTTCATGAGGCATCTGGGATTCAGCATATTGGCAGCAGCAGCAGCAGAAATACTGCAACTTATGACACCTTGAGAAAAGATTTTCTAATGGCCTTAGATGTTGGTAGATGA 2229 0.4177 MLLTKVSASILLIVSVMVTAASTQALQGCPNKCGEVEISYPFGIGKECQLNEDFNVNCDFTTGTPMLGGIPFINISIAEGQVCIRMFVANDCYNETGIQVQQNSPWLRTSTFTISNTKNKFIAVGCDTSGTVIGYHNSRRYEIGCSSVCESIDPQEIDGTCSGVGCCEVDIPSGWENITVVAKSFNAHKDVYHFNPCSFAFVGEGSRFQFSADSLLSLPAQLPLVLDWAIGNETCESTSGNICKGNSKCVDLETRSGYLCKCSDGFEGNPYHPDGCLDIDECKDGKLNNCIHKDMCQNTIGNYTCGCPIGLEGDGRENGTRCQLQAAQRNKNKSHVIHATVGASVAFVALVVSISWLCLMLQKRKLIKLKQRFFRQNGGLILKQQLHKREGSPDTAKIFTSEELKKATNNYDENLIIGTGGFGTVFKGTLEDNKIVAIKKSKIVDQSQIGQFINEVVVLSQINHRNVVKLLGCCLETEVPLLVYEFVNNGTLHDYIHNEGKLSAISLTTRLRIAAEAAGALAYLHSAATVPIIHRDVKTANILLDDCYIAKVADFGASRLVPIDQTELATMVQGTLGYLDPEYMLTSQLTEKSDVYSFGVVLLELLTRMKPLSFDRPQENRSLAKYFLICFKEDRLFEILDSGVVNEGNMQLVREVAILAAKCLRVKGDERPGMKEVAMELEGMLRMIEEHPWVTVNLNQDEGLHLLHEASGIQHIGSSSSRNTATYDTLRKDFLMALDVGR* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01947 742 CDD EGF_CA 278 314 - -
Pte3g01947 742 ProSiteProfiles Protein kinase domain profile. 411 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g01947 742 ProSitePatterns Protein kinases ATP-binding region signature. 417 440 IPR017441 GO:0005524
Pte3g01947 742 Gene3D Transferase(Phosphotransferase) domain 1 487 698 - -
Pte3g01947 742 FunFam Wall-associated receptor kinase 2 381 486 - -
Pte3g01947 742 ProSitePatterns Calcium-binding EGF-like domain signature. 278 305 IPR018097 GO:0005509
Pte3g01947 742 Gene3D Phosphorylase Kinase; domain 1 382 486 - -
Pte3g01947 742 SMART egfca_6 278 323 IPR001881 GO:0005509
Pte3g01947 742 SMART egfca_6 235 277 IPR001881 GO:0005509
Pte3g01947 742 SMART egf_5 281 323 IPR000742 -
Pte3g01947 742 SMART egf_5 234 277 IPR000742 -
Pte3g01947 742 Pfam Calcium-binding EGF domain 278 322 IPR001881 GO:0005509
Pte3g01947 742 FunFam Fibrillin 2 273 319 - -
Pte3g01947 742 Pfam Protein kinase domain 413 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g01947 742 CDD EGF_CA 238 268 - -
Pte3g01947 742 SMART serkin_6 411 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g01947 742 Pfam Wall-associated receptor kinase galacturonan-binding 29 67 IPR025287 GO:0030247
Pte3g01947 742 ProSitePatterns Serine/Threonine protein kinases active-site signature. 532 544 IPR008271 GO:0004672|GO:0006468
Pte3g01947 742 Gene3D Laminin 281 324 - -
Pte3g01947 742 SUPERFAMILY Protein kinase-like (PK-like) 393 681 IPR011009 -
Pte3g01947 742 SUPERFAMILY EGF/Laminin 278 315 - -
Pte3g01947 742 Gene3D Laminin 232 280 - -
Pte3g01947 742 ProSiteProfiles EGF-like domain profile. 231 277 IPR000742 -
Pte3g01947 742 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 20 686 IPR045274 GO:0007166
Pte3g01947 742 ProSiteProfiles EGF-like domain profile. 278 323 IPR000742 -
Pte3g01947 742 FunFam Wall-associated receptor kinase 2 487 704 - -
Pte3g01947 742 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 296 307 IPR000152 -
Pte3g01947 742 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01947 Pte-Chr3 31211144 31214874 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01947 11 743 Receptor kinase-like Gene Family AT1G21230 44.638 0.0 595
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Pte3g01947 Pkinase 5.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01947 - - vvi:100252247 788.104