Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01937 ATGATTGAAAGATTGATGCATGACATTCACTTCGCTGTTGATCCGAGTAGCAGCTCTAAGAAGCAGGCACTTGAAGTTATTCAGGAGCTTCAGAAGCGCTTCCCTATTAAACGGTGCCCTTTAAGACTACGTGTTACTGTTCCTGTGGAGGAATCCTCTGCTCTCTTCGAAAAACTAACGGCTTGGAAGGCTGACATCATTTCCAAAGAAGAGTCTGGCTCTACACATTCAGTAATTTTTGAAATGGAACCTAATCTCTATAAAGAGTGTCATGACTTCGTCATGAAGAATGTCCATGGAAAGTTTGAAGTACTTGCACACTCCATGTATGTAGATGGGGATACCCATGTTGATCAATATGATGAACATGAGGATGTATCAGCGCTGCAACCCAGACAAGCACATGCTGTTGGTGATCTGAGTGAGAAAATGCAAAAGCAGACTATTGCTCTTGTAAGTAGAACTGTTGAGGGACAACAAAGACAAAACAGATGCAGCACATGCAATGTCTCATTTGGTGATGCCACCCAGTGCCGAGAACACCACAAGAGTGACTGGCACAAGCACAATATAAGGCGTAAGACGAAACAACTTCCTCCCCTCACTGAAGAAGAGTGCATGGCCGACATGGAATTGGGCGAATCAAAGGCTGATTTGAAGGAATATTCGTTCTAA 675 0.4356 MIERLMHDIHFAVDPSSSSKKQALEVIQELQKRFPIKRCPLRLRVTVPVEESSALFEKLTAWKADIISKEESGSTHSVIFEMEPNLYKECHDFVMKNVHGKFEVLAHSMYVDGDTHVDQYDEHEDVSALQPRQAHAVGDLSEKMQKQTIALVSRTVEGQQRQNRCSTCNVSFGDATQCREHHKSDWHKHNIRRKTKQLPPLTEEECMADMELGESKADLKEYSF* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01937 224 SUPERFAMILY Hypothetical protein AF0491, middle domain 1 38 IPR037188 -
Pte3g01937 224 Gene3D - 1 39 IPR037188 -
Pte3g01937 224 PANTHER RIBOSOME MATURATION PROTEIN SBDS 1 111 IPR039100 -
Pte3g01937 224 Gene3D Classic Zinc Finger 152 213 - -
Pte3g01937 224 SUPERFAMILY beta-beta-alpha zinc fingers 148 194 IPR036236 -
Pte3g01937 224 ProSitePatterns Zinc finger C2H2 type domain signature. 165 187 IPR013087 -
Pte3g01937 224 Pfam SBDS protein, C-terminal domain 42 104 IPR046928 -
Pte3g01937 224 Gene3D - 41 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01937 Pte-Chr3 31071259 31073148 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01937 1 225 C2H2 Transcription Factor Family AT1G43860 50.628 4.92e-82 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01937 K14574 - gmx:100797497 320.857