Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01910 ATGGATTCTGATCAATCTGACTCACAATCAACAGAACAATCACCACCACCACCAACAGATTCATCATCGTCGCCACCTCCTCCATCGGACGGATCATCCTCACCACCACCACCTTCAGATAATCAATCACCCCCACCGCCGTCAGATAGTCAATCATCGCCTCCACCGCCATCAGATAATCAATCATCCCCACCACCGCCTTCAGATTCATCACCGCCACCTCCGTCTAACCAATCGCCGCCTTCAGACAACGACTCATTTTCAAAGCAATCTTCGAACGACGACTCATCACCCTCACCTCCGACTTCGTCTTCCAATGATGGGGGAAAGAAAAACTCAGCACCTGCACCATCCTCAAGAGGATCTTCTGGTTCTTCTAAACAAGGATCGTCATCTTCATCAGATAAGAAGCAATTGGCAGGCGATCGTGAATCCTCACAGAAAAAACATTCAGGGTCTAAGAAATCTTCAAAATCAGGCGATGGTGACAGTGATGGACTTTCTAAAGACGCTATAGTAGGAATTGCAGCTGGTGCTGCCTTGTTACTTGCTGTCATGGTATTATTGATCGTTTGCTGCGTAAAGAAGAAGAAGAAGACTGCACAGTACATCCCAACTCGTCTAGACGATAACGACTACTACAATAGAGCTGCCTCACCAAATATGCCAGCACAACCTGGTGATCATTTTGTGAATATACCACCACCTCCAGGGGTAGCAAACAAACCATGGATGGCAACACCGCCGCCTCCATCACAGCCAAACCTAATTAGCAGTGATATGAGCAGTGGCGCTTTCTCAGGGCCACACGGTCCTCTTATGCCACCACCTCATCCTTCTGTAGCACTTGGATTCAACAAGAGCACGTTCACATATGAAGAGCTACTGGCTGCAACAGGAGGGTTCTCCCAAGATAATCTCTTAGGTCAAGGAGGTTTTGGCTATGTCCACAAAGGGGTGCTGCCTAATGGAAAGGAAATTGCAGTTAAGAGTCTGAAAGCTACTAGTGGACAAGGCGATCGTGAATTCCAAGCTGAAGTTGACATTATTAGCCGCGTCCATCATCGTCACCTTGTGTCACTTGTTGGGTATTCCATATCAGGAGAGCAGAAGTTGTTGGTTTATGAGTATGTGCCTAATAAAACACTCGAATACCACCTATATGGAAAAGGCACGCCAGTCATGGATTGGCCAACCAGGCTCAAAATTGCTATTGGATCTGCTAAAGGCCTTGCTTACTTGCATGAAGATTGTCACCCTCGGATTATTCATCGTGACATCAAAGCTGCAAACATTCTTCTCGAAACTAATTTTGATGCAAAGGTGGCTGATTTCGGATTGGCAAAGCTTAACCAAGACAACTACACTCATGTTTCTACACGTGTTATGGGAACATTTGGGTACCTTGCTCCTGAATATGCATCAAGTGGTAAGTTAACTGAGAAGTCTGATGTTTTCTCCTTTGGGGTTATGCTTTTGGAGCTCATAACAGGACGACCTCCTGTGGATCAAACTGGAAGATTTGAAGACAGCCTAGTGGATTGGGCCAGACCACTTTGCGCACGTGCATTAGACACAGATGACTATGATGAACTAGTGGATCCTCGGCTGGAAGAAAATTACAATAAACAAGAGATGTCATGCATGGTTGCTTGTGCTATTGCGAGTGTTAGGCACTCAGCAAGAAGACGACCAAAAATGAGTCAGGTTGTCCGTACATTGGAAGGTGATGTCTCTTTGGATTCTTTGAATGAGGGACTGAAACCAGCTGGTCAGGCTAGTGCAGTATTCAGCTCTGATAGTTCTGAATATGACTCTAGTTCATACAGTGGTGACATGAAGAAGTTCAGGAAGCTAGCACTGGGCACTGAGAACTTTGATGGGCATTCTGGTACAAGCAGTGATTCAATGATGAGCAGGAAAGGAAATTCAAACATAATGAACAGCCATTGA 1953 0.4567 MDSDQSDSQSTEQSPPPPTDSSSSPPPPSDGSSSPPPPSDNQSPPPPSDSQSSPPPPSDNQSSPPPPSDSSPPPPSNQSPPSDNDSFSKQSSNDDSSPSPPTSSSNDGGKKNSAPAPSSRGSSGSSKQGSSSSSDKKQLAGDRESSQKKHSGSKKSSKSGDGDSDGLSKDAIVGIAAGAALLLAVMVLLIVCCVKKKKKTAQYIPTRLDDNDYYNRAASPNMPAQPGDHFVNIPPPPGVANKPWMATPPPPSQPNLISSDMSSGAFSGPHGPLMPPPHPSVALGFNKSTFTYEELLAATGGFSQDNLLGQGGFGYVHKGVLPNGKEIAVKSLKATSGQGDREFQAEVDIISRVHHRHLVSLVGYSISGEQKLLVYEYVPNKTLEYHLYGKGTPVMDWPTRLKIAIGSAKGLAYLHEDCHPRIIHRDIKAANILLETNFDAKVADFGLAKLNQDNYTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRPPVDQTGRFEDSLVDWARPLCARALDTDDYDELVDPRLEENYNKQEMSCMVACAIASVRHSARRRPKMSQVVRTLEGDVSLDSLNEGLKPAGQASAVFSSDSSEYDSSSYSGDMKKFRKLALGTENFDGHSGTSSDSMMSRKGNSNIMNSH* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01910 650 MobiDBLite consensus disorder prediction 137 165 - -
Pte3g01910 650 MobiDBLite consensus disorder prediction 1 166 - -
Pte3g01910 650 Pfam Protein tyrosine and serine/threonine kinase 305 512 IPR001245 GO:0004672|GO:0006468
Pte3g01910 650 Gene3D Transferase(Phosphotransferase) domain 1 378 585 - -
Pte3g01910 650 MobiDBLite consensus disorder prediction 624 650 - -
Pte3g01910 650 ProSitePatterns Serine/Threonine protein kinases active-site signature. 422 434 IPR008271 GO:0004672|GO:0006468
Pte3g01910 650 ProSitePatterns Protein kinases ATP-binding region signature. 308 330 IPR017441 GO:0005524
Pte3g01910 650 MobiDBLite consensus disorder prediction 81 136 - -
Pte3g01910 650 FunFam Proline-rich receptor-like protein kinase PERK1 378 585 - -
Pte3g01910 650 MobiDBLite consensus disorder prediction 626 650 - -
Pte3g01910 650 MobiDBLite consensus disorder prediction 18 80 - -
Pte3g01910 650 FunFam proline-rich receptor-like protein kinase PERK1 280 377 - -
Pte3g01910 650 SMART serkin_6 302 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g01910 650 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 178 619 IPR047117 -
Pte3g01910 650 SUPERFAMILY Protein kinase-like (PK-like) 280 574 IPR011009 -
Pte3g01910 650 MobiDBLite consensus disorder prediction 1 17 - -
Pte3g01910 650 Gene3D Phosphorylase Kinase; domain 1 279 377 - -
Pte3g01910 650 ProSiteProfiles Protein kinase domain profile. 302 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01910 Pte-Chr3 30511613 30514500 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01910 166 638 Trihelix Transcription Factor Family AT1G70460 51.042 3.06e-151 452
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pte3g01910 PK_Tyr_Ser-Thr 2.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01910 - - jre:109003295 602.053