Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01906 ATGTCAGGTTCCCAGAACTCTTCAGCTGCCATCGGTTATCAGTCGGTGTTTTCTTACACAACAGCTGTCTTCGGTCTTAAGCTTTACATTTTGATAGCTATTCTCATTGGGATCACTCTGGTGGTTCTGGCGCTAATCTATCTCTGTTTTCGCTGGAAGCGAAGGGCTTCCCAGCGTGGAATGAGAGTGAAAAGTAGCTCAGCTTTGATCCCAGTGGTCTCTAAGGAGATCGTTGAGATCAAAGGACTGGACTTGGATCTCAATTCTGAGAAAACTGAGGTCAAAATTGGAAATGCTGATCCAAAGAAGGAGCGAGTAGAGGTCGGAGGAGAAGGGAAAAGCAGCACCGGGAGTGACGTGTCAGGTGGTAGTCGGAGTGACATGTCGGTGGAGTCTCAAAACATCGGGTGGGGAAGATGGTATAGTTTGAAAGAGCTGCAAGTGGCGACACGTGGCTTCGCTCAAGAGAATGTGATTGGAGAAGGTGGGTATGGGATTGTGTACAGAGGAATTTTGCCTGATGGTTCTGTTGTGGCAGTCAAGAACCTTCTCAACAACAAAGGCCAGGCGGAGAAGGAATTCAAGGTAGAGGTGGAAGCCATTGGAAAAGTAAGGCATAAGAATCTAGTTGGTCTAGTTGGATATTGTGCAGACGGTCCTCAAAGAATGCTAGTCTATGAATATGTTGACAACGGGAATTTGGAGCAGTGGCTGCATGGTGATGTCGGCACTGTTAGCCCGTTGACATGGGAGATTAGGATGAAAATTGCAATTGGTACAGCAAAAGGGCTAGCCTATTTGCATGAAGGATTAGAACCAAAAGTTGTGCATCGAGATGTTAAATCCAGCAATATCCTTCTAGATAGAAAGTGGAATGCTAAAGTGTCAGATTTTGGACTGGCTAAGCTCTTAGGATCTGAGGCAAGCTATGTGACAACACGTGTAATGGGGACATTCGGATACGTCTCTCCCGAGTATGCAAGCACAGGCATGCTTAATGAAGGGAGTGATGTGTACAGTTTTGGAGTTTTGCTCATGGAAATAATTACAGGAAGAAGCCCAGTTGATTATTCCAAACCAGCTGGGGAGATGAACCTAGTTGATTGGTTTAAGGGAATGGTAGCTACACGTCGCGGTGAAGAGGTTGTAGATCCTTTGATAGAGGTTCAGCCAGCACCACGATCTTTGAAGCGAGCATTACTGGTTTGTCTCCGCTGTATAGATTTGGATGTTAATAAGCGACCAAAAATGGGGCAAATTGTTCACATGCTTGAGGCAGATGATTTTCCCTTCCGTTCTGAACTTCGTTCTGCCAGAGATAAAGATTCCCTTCCCTCAAATGATGCTGTTACCAAGAAAATATCTCAACCACCAAATCAGGCCATTGGTCATCCTGATTCAGTTGAAAGATGA 1413 0.4536 MSGSQNSSAAIGYQSVFSYTTAVFGLKLYILIAILIGITLVVLALIYLCFRWKRRASQRGMRVKSSSALIPVVSKEIVEIKGLDLDLNSEKTEVKIGNADPKKERVEVGGEGKSSTGSDVSGGSRSDMSVESQNIGWGRWYSLKELQVATRGFAQENVIGEGGYGIVYRGILPDGSVVAVKNLLNNKGQAEKEFKVEVEAIGKVRHKNLVGLVGYCADGPQRMLVYEYVDNGNLEQWLHGDVGTVSPLTWEIRMKIAIGTAKGLAYLHEGLEPKVVHRDVKSSNILLDRKWNAKVSDFGLAKLLGSEASYVTTRVMGTFGYVSPEYASTGMLNEGSDVYSFGVLLMEIITGRSPVDYSKPAGEMNLVDWFKGMVATRRGEEVVDPLIEVQPAPRSLKRALLVCLRCIDLDVNKRPKMGQIVHMLEADDFPFRSELRSARDKDSLPSNDAVTKKISQPPNQAIGHPDSVER* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01906 470 Gene3D Phosphorylase Kinase; domain 1 122 228 - -
Pte3g01906 470 SUPERFAMILY Protein kinase-like (PK-like) 126 425 IPR011009 -
Pte3g01906 470 CDD STKc_IRAK 159 425 - -
Pte3g01906 470 ProSitePatterns Serine/Threonine protein kinases active-site signature. 275 287 IPR008271 GO:0004672|GO:0006468
Pte3g01906 470 MobiDBLite consensus disorder prediction 114 128 - -
Pte3g01906 470 PANTHER OS01G0323000 PROTEIN 17 444 - -
Pte3g01906 470 ProSiteProfiles Protein kinase domain profile. 153 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g01906 470 SMART serkin_6 153 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g01906 470 FunFam Probable serine/threonine-protein kinase At1g01540 133 228 - -
Pte3g01906 470 FunFam Putative receptor-like serine/threonine-protein kinase 229 439 - -
Pte3g01906 470 MobiDBLite consensus disorder prediction 448 462 - -
Pte3g01906 470 MobiDBLite consensus disorder prediction 96 110 - -
Pte3g01906 470 ProSitePatterns Protein kinases ATP-binding region signature. 159 181 IPR017441 GO:0005524
Pte3g01906 470 MobiDBLite consensus disorder prediction 436 470 - -
Pte3g01906 470 MobiDBLite consensus disorder prediction 96 128 - -
Pte3g01906 470 Pfam Protein kinase domain 154 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g01906 470 PIRSF TyrPK_CSF1-R 5 57 - -
Pte3g01906 470 PIRSF TyrPK_CSF1-R 243 460 - -
Pte3g01906 470 PIRSF TyrPK_CSF1-R 174 246 - -
Pte3g01906 470 Gene3D Transferase(Phosphotransferase) domain 1 229 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01906 Pte-Chr3 30472877 30476270 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01906 122 420 Trihelix Transcription Factor Family AT1G68690 48.039 1.29e-94 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Pte3g01906 Pkinase 7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01906 - - cave:132185293 704.901