Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01903 ATGATGGACCAGCGAAGCATCCTAGTTTTTGTGTTCTTGTTAGCATGGCGGTTCCAGTTCACATTGCAACAGCTTGAGCCAATGAGTTCGTCAGCTGAAAGAGAAGCTCTTCTTCAACTCAGGTCGTCTCTAGGCTTGAGGAGTAGGGACTGGCCGAGGAAGGCTGACCCTTGTTTACTATGGACGGGTATCCAGTGTCGGAATGGTTCAGTGGTCGGAATCAATATCTCTGGATTCAGAAGAACCAGATTTGGCAGACGAAACCCACAATTTGTTGTGGATGCCTTGGCCAATCTTACACTCTTGGAATCCTTTAATGCTTCAAGGTTCTTGCTTGCTGGTCCTATTCCTGACTGGTTTGGACAACGGCTTCCTGCACTGCAAGTGCTTGATCTTCGTTCTTGCTCTGTAAACGCTGCTCTTCCTTCAAGTATTGGCAATTTATCTAATCTAACTGGCCTGTATCTCTCTCACAATAGCCTCACAGGGGCAATTCCTACCACTTTGGGTCAGTTGCTACGCCTGTCAGTACTTGACCTTTCACAGAACTCGCTTACTGGATCCATACCTTCGTCATTTGCTTCCCTTGGGAATCTTTCCATTCTCGACATTTCTGCCAATTACTTATCCGGTTCAGTTCCTCCAGGCATTGGAACCCTACAGAAGTTACAATATTTGAATCTTTCCAACAATGGCTTAACATCTGCAATACCTGCTCAGTTAGGGGATCTCAGTAGCTTGGTTGACCTTGATCTCAGTGCAAATTCTTTTTCCGGTTCAGTTTCACCGGATTTAAGAGGGATGAGGAGCTTGCGCAGAATGTTTCTTGGGAATAACTTGCTTGTTGGTCCTTTACCTCAGCACTTGTTCCCTTCTTCCTCACCGTTGCAGGTAATTGTTTTAAGAAATAACAATTTCACTGGAGCGTTGCCTGATGCGCTGTGGTCTATGACTGCATTGAGTTTTGTGGATATTTCTGGTAACAACTTCACTGGTTTGCTTCCAAATTCTAGTCTTAGTGCAAATTTCACGGCTGCTGAACTCAATATGTCTCAAAATTCATTCTACGGAGGACTCACACCTGTGCTTGGAAGGTACAGCACAGTTGATCTATCAAGCAACTATTTTGAGGGCGGGGTTTCCTCATACGTGCCAAAGAATGCATCTCTTGATATTAACTGTCTCAAGAATGTATCCAAGCAGAGAAGAACAGAAGAATGTGTTTCCTATTATGCTGAGCAGGGTTTGACTTTTAATAATTCTGGAGAAACGAATTCGACACAACCTCCTGAGGCAAGAAAATCTGGGGAGAGTCGCAGAAAGACCATCATATTGGCTGCGGTGTTGGGTGGATTGGGTTTGTCGGTATTTCTGGTGTTGTTAACAATATTGATGCTCCTATGTGCACGTAACAGACCGCCGACCACAAATCAAAGGGGGGCTGGTGTTGGCCCTGCGCCTCCTGGAGATAGTCCTAAGCCTTCTGGTGTGTTCATAAACCTCTCACAACTAGGAGTGAAATCGTTTGCATATCATCAGCTGCTCCAAGCCACCGATGACTTCAGTAATACAAATCTCATTAAAAATGGTCACTCCGGGGACCTCTACAGGGGTTTGTTGGAGAATGGTATCCCTGTAGTTATCAAAAAAATTGATCTTCTCTCGTTTAGAAATGAATCATATCTACTGGAAGTAGAGTTTTTCAGTAAAGTTTCTCATCCAGGGGTGGTTCCCCTGTTGGGATATTACTTAGAGAATGAGAACGAAAAGTTTCTGGTTTACAAATACATGCCGAATGGGGACTTGTCAAATTGCCTGCACCGTAAGAGTATTTCTGTGGACGGTACTTTACAGTCACTGGATTGGATAACAAGGTTGAAAATAGCTTTAGGAGCTGCGGAGAGCCTTTCTTATTTGCATCATGAGTGTACCCCACCATTTGTGCACAGAGATGTGCAGGCTAGCAGCATAATTCTTGATGATAAATACGAAGTGCGTTTAGGGAGCCTCTCTGACGTATGTGTTCAAGAGGGGGATACTCATCAAAGCAGAATTACGAGATTACTACGGTTTCCCCAGTCATCTGAACAAGGCACATCTGCAGGCTCTTCAACATCAACCTGCTCTTACGATGTTTACTGCTTTGGGAAGGTATTGCTTGAGTTGGTAACTGGTAAGTTGGGAATCAGTGCAACCAGTGATGCTGACCTGAAGGAATGGTTGGAGCAGACATTACCATGCATCAACATATATGACAAGGAATCAGTGACAAAAATTGTTGATCCCACTATGATTGTGGATGAAGATCTCCTAGAAGAAGTTTGGGCAATGGCCATTGTAGCCAGGTCCTGCCTTAA 2357 0.4434 MMDQRSILVFVFLLAWRFQFTLQQLEPMSSSAEREALLQLRSSLGLRSRDWPRKADPCLLWTGIQCRNGSVVGINISGFRRTRFGRRNPQFVVDALANLTLLESFNASRFLLAGPIPDWFGQRLPALQVLDLRSCSVNAALPSSIGNLSNLTGLYLSHNSLTGAIPTTLGQLLRLSVLDLSQNSLTGSIPSSFASLGNLSILDISANYLSGSVPPGIGTLQKLQYLNLSNNGLTSAIPAQLGDLSSLVDLDLSANSFSGSVSPDLRGMRSLRRMFLGNNLLVGPLPQHLFPSSSPLQVIVLRNNNFTGALPDALWSMTALSFVDISGNNFTGLLPNSSLSANFTAAELNMSQNSFYGGLTPVLGRYSTVDLSSNYFEGGVSSYVPKNASLDINCLKNVSKQRRTEECVSYYAEQGLTFNNSGETNSTQPPEARKSGESRRKTIILAAVLGGLGLSVFLVLLTILMLLCARNRPPTTNQRGAGVGPAPPGDSPKPSGVFINLSQLGVKSFAYHQLLQATDDFSNTNLIKNGHSGDLYRGLLENGIPVVIKKIDLLSFRNESYLLEVEFFSKVSHPGVVPLLGYYLENENEKFLVYKYMPNGDLSNCLHRKSISVDGTLQSLDWITRLKIALGAAESLSYLHHECTPPFVHRDVQASSIILDDKYEVRLGSLSDVCVQEGDTHQSRITRLLRFPQSSEQGTSAGSSTSTCSYDVYCFGKVLLELVTGKLGISATSDADLKEWLEQTLPCINIYDKESVTKIVDPTMIVDEDLLEEVWAMAIVARSCL 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01903 785 FunFam Predicted protein 490 596 - -
Pte3g01903 785 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g16250 30 189 - -
Pte3g01903 785 Gene3D Ribonuclease Inhibitor 292 407 IPR032675 -
Pte3g01903 785 Pfam Leucine Rich Repeat 222 257 IPR001611 GO:0005515
Pte3g01903 785 Pfam Leucine rich repeat 269 330 IPR001611 GO:0005515
Pte3g01903 785 Pfam Leucine rich repeat 149 209 IPR001611 GO:0005515
Pte3g01903 785 PRINTS Leucine-rich repeat signature 220 233 - -
Pte3g01903 785 PRINTS Leucine-rich repeat signature 175 188 - -
Pte3g01903 785 FunFam Leucine-rich repeat receptor protein kinase EMS1 190 288 - -
Pte3g01903 785 Gene3D Transferase(Phosphotransferase) domain 1 597 785 - -
Pte3g01903 785 SUPERFAMILY L domain-like 86 378 - -
Pte3g01903 785 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 97 776 - -
Pte3g01903 785 Pfam Leucine rich repeat N-terminal domain 32 66 IPR013210 -
Pte3g01903 785 Gene3D Phosphorylase Kinase; domain 1 494 596 - -
Pte3g01903 785 ProSiteProfiles Protein kinase domain profile. 521 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g01903 785 SUPERFAMILY Protein kinase-like (PK-like) 497 751 IPR011009 -
Pte3g01903 785 FunFam Putative LRR receptor-like serine/threonine-protein kinase 597 785 - -
Pte3g01903 785 Gene3D Ribonuclease Inhibitor 192 291 IPR032675 -
Pte3g01903 785 Gene3D Ribonuclease Inhibitor 30 191 IPR032675 -
Pte3g01903 785 Pfam Protein tyrosine and serine/threonine kinase 525 743 IPR001245 GO:0004672|GO:0006468
Pte3g01903 785 SMART LRR_typ_2 220 244 IPR003591 -
Pte3g01903 785 SMART LRR_typ_2 124 147 IPR003591 -
Pte3g01903 785 SMART LRR_typ_2 268 292 IPR003591 -
Pte3g01903 785 SMART LRR_typ_2 317 340 IPR003591 -
Pte3g01903 785 SMART LRR_typ_2 172 195 IPR003591 -
Pte3g01903 785 SMART LRR_typ_2 148 171 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01903 Pte-Chr3 30451459 30455822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01903 26 693 Miscellaneous Gene Families AT2G16250 56.528 0.0 714
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Pte3g01903 PK_Tyr_Ser-Thr 5.3e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01903 - - qsa:O6P43_001901 1084.32