Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01876 ATGGCTTCCTCAAGTGGCACATCTTCAGGGTCCTCCTTCATTCAAAACTCTGGCTCTGAGGAGGATTTGCAGGTGCTTATGAATCAGAAGAAAAGGAAAAGAATGATTTCGAATCGTGAATCGGCAAGGAGATCTCGGATGAGGAAACAGAAGCACTTGGATGATCTGATACAACAAGTGGCTCGGCTCAGAAAAGAGAACCAGCAGATTTCTACAAGCGTCCACATGACCACCGAGCATTTCTTGAAAGTGGAGAGTGAAAACTCCATATTGAGAGCTCGAGTGAATGAACTCAGCCATAGACTGCAGTCTTTGAATGAGATGATCCATTTATTGAATGTGAGCAATGCTGTCATGGGTGCAGGGGAATCACCGGTTAACCATTTCCAGCTTGAGCCTACTATCGATCATCCTAGCTTCTTCAATCCGTTGGGCATGGCCTACATGAACCAACCAATCATGGCCGCCGCACACATGTCACAGTATTGA 489 0.4601 MASSSGTSSGSSFIQNSGSEEDLQVLMNQKKRKRMISNRESARRSRMRKQKHLDDLIQQVARLRKENQQISTSVHMTTEHFLKVESENSILRARVNELSHRLQSLNEMIHLLNVSNAVMGAGESPVNHFQLEPTIDHPSFFNPLGMAYMNQPIMAAAHMSQY* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01876 162 PANTHER BZIP TRANSCRIPTION FACTOR 44 4 158 - -
Pte3g01876 162 MobiDBLite consensus disorder prediction 25 51 - -
Pte3g01876 162 Coils Coil 88 108 - -
Pte3g01876 162 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 91 IPR004827 GO:0003700|GO:0006355
Pte3g01876 162 Pfam bZIP transcription factor 30 88 IPR004827 GO:0003700|GO:0006355
Pte3g01876 162 MobiDBLite consensus disorder prediction 1 51 - -
Pte3g01876 162 MobiDBLite consensus disorder prediction 1 24 - -
Pte3g01876 162 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
Pte3g01876 162 Coils Coil 46 73 - -
Pte3g01876 162 FunFam BZIP transcription factor 28 79 - -
Pte3g01876 162 CDD bZIP_plant_GBF1 31 81 IPR045314 GO:0003700|GO:0006355
Pte3g01876 162 Gene3D - 28 83 - -
Pte3g01876 162 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
Pte3g01876 162 SUPERFAMILY Leucine zipper domain 30 81 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01876 Pte-Chr3 29850672 29852160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01876 26 163 bZIP Transcription Factor Family AT4G34590 53.147 3.41e-43 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte3g01876 bZIP_1 7.1e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01876 K25786 - qsa:O6P43_001877 203.756