Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01866 ATGGGATTGGAGAAGGATGCTCTAACAACTGCATGCGTGGATATAGAACAGAAGATTGTGGTTAATTACAACCCTAAAGGTAGAGGCAAATCCAGCAGTGTACACCATAGTTACCTTCCCATTTCTTTTTGCTGTTATGTTTGGGGATTGGGGGCATGGAATTTGCTTGTTGCTGGCCACTTTATCTTATCATCAGGGAGAAAAAACTTTCTAGCCAGGTTTCAATTTTTTCCTGAGATCATTTTTCTGAACAGTCTTTTTGGCTACCTGTCCTTGCTTATTATCATCAAATGGTGCACTGGTTCACAAACTGATCTATACCGTGAAATGATATATATGTTCCTAAGTCCCACTGATGATCTAGGCGAAAACCAGCTTTTTGAAGCTTGTATTGTTGGCACTGGCTCTCTTGTCTGTGCCTTGGATGTTGATTCCAAAACCTTTTCTATTGAAGAAGCAACACCAAGACGTCGGTTTGATGCGATATTAGATATATGTCCTTCCATTCTTCTAAAAAAAAAAGTGCTTCTATTTTATCGTTCTCCTAGTCTCTGA 555 0.3946 MGLEKDALTTACVDIEQKIVVNYNPKGRGKSSSVHHSYLPISFCCYVWGLGAWNLLVAGHFILSSGRKNFLARFQFFPEIIFLNSLFGYLSLLIIIKWCTGSQTDLYREMIYMFLSPTDDLGENQLFEACIVGTGSLVCALDVDSKTFSIEEATPRRRFDAILDICPSILLKKKVLLFYRSPSL* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01866 184 PANTHER VACUOLAR PROTON ATPASES 70 128 IPR002490 GO:0033179|GO:0046961|GO:1902600
Pte3g01866 184 Pfam V-type ATPase 116kDa subunit family 73 128 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01866 Pte-Chr3 29727056 29732661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01866 73 127 Primary Pumps ATPases(2) AT2G28520 81.818 1.44e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01866 K02154 - qsu:111988451 109.383