Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01849 ATGGCTGCCACTAATATCTATACCTCTTCATCCTCTCTTTCGAGGTCAGCCTGTGAACCTCTGAATCCAACGAATACCCGTTCCCTGCTTTCCGCAAAAACCCTTCAAAACCCTCCCTTCCACCAAAAATCCAATTTTTTTCCTGCCGCCTCAACCTTAGCTCAAACCCTGAAGGTCCCTTTCACCATCTCTGCGAAGAACCCTATTTCTGAGTTATTTTCTGAAAATAAATCACACCCAGATGACAATTCTTCAGTCTACTACGACGATGACGAAAAGCCCCGTGAGGAGTGTGGCGTTGTGGGTATCTACGGGGATCCAGAAGCCTCCCGCCTTTGCTATTTGGCACTTCACGCCCTTCAGCATCGCGGCCAAGAGGGAGCTGGGATTGTTTCTGTGCAAAACAACGTTTTACATTCTATAACTGGAGTTGGGCTCGTCTCCGACGTGTTCAATGAGTCTAAGCTTGACCAACTGCCTGGAGATTTGGGTATTGGGCATGTTAGGTATTCCACAGCTGGTGCTTCCATGTTGAAAAACGTCCAGCCTTTTGTTGCAGGCTACCGGTTTGGCTCAGTTGGGGTTGCCCACAATGGTAACTTGGTTAATTATGGAGCTCTGAGGGCCAAGCTTGAAGAAAATGGATCGATTTTTAACACTAGTTCGGATACCGAGGTGGTACTTCACCTTATTGCTACTTCAAAGCAAAGGCCTTTCCATCTGAGAATTGTTGATGCTTGTGAGAGGCTTGAGGGGGCTTATTCAATGGTCTTCGTTACAGAGGATAAGCTGGTTGCTGTGAGAGACCCTTTGGGGTTTCGACCCTTAGTTATGGGGAGGAGGAGCAACGGTGCAATAGTGTTTGCCTCTGAGACTTGTGCTCTGGACTTGATTGAGGCCACTTACGAACGAGAGGTGTATCCAGGTGAGGTTCTAATTGTTGACAAAAATGGACTTCAATCACTTTGCCTGATGACTCATCTACAGCCAAAACAGTGTATCTTTGAGCATATTTACTTTGCGCTTCCCAATTCAGTGGTTTTTGGACGATCTGTCTATGAGTCTAGGAGAAAATTTGGGGAGATATTGGCTACCGAAAGTCCTGTTGATTGTGACGTTGTGATAGCAGTTCCAGATTCTGGAGTGGTCGCTGCACTTGGTTATGCTGCAAAAGCTGGTGTGCCTTTTCAGCAGGGGTTGATTAGGTCTCACTATGTTGGTCGAACTTTCATTGAGCCGTCACAAAAAATTAGAGACTTTGGAGTCAAGCTGAAGCTCTCACCTGTGCGAGCAGTATTGGAAGGCAAAAGGGTTGTGGTTGTGGATGATTCAATTGTGAGGGGAACTACATCATCTAAAATAGTTAGGATGATTAAAGAGGCAGGAGCTAAGGAAGTACATATGAGAATTTCCAGCCCACCAATCATTGGTTCTTGCTATTATGGAGTGGACACACCTAGTTCAGAGGAGCTGATATCCAATAGGATGAGTGTGGAGGAGATCAAAGACTTTATTGGATCAGATTCACTTGCTTTCCTGCCAATCGATAGCTTAAAACGAGTATTAAGTGATGATTCTCCCAATTACTGTTATGCTTGCTTCTCTGGGAAGTACCCTGTTGAACCCAGAGAGATCAAAGTGAAAAGGGTTGGTGATTTTGTGGACGATGGATTGAGTGGCAGTCCAGAATTCATTGATGGGGGCTGGGTTCATGCCAATAGAACTCCAAAAGAGGAGGTTGGAAGTGTCTAG 1752 0.4566 MAATNIYTSSSSLSRSACEPLNPTNTRSLLSAKTLQNPPFHQKSNFFPAASTLAQTLKVPFTISAKNPISELFSENKSHPDDNSSVYYDDDEKPREECGVVGIYGDPEASRLCYLALHALQHRGQEGAGIVSVQNNVLHSITGVGLVSDVFNESKLDQLPGDLGIGHVRYSTAGASMLKNVQPFVAGYRFGSVGVAHNGNLVNYGALRAKLEENGSIFNTSSDTEVVLHLIATSKQRPFHLRIVDACERLEGAYSMVFVTEDKLVAVRDPLGFRPLVMGRRSNGAIVFASETCALDLIEATYEREVYPGEVLIVDKNGLQSLCLMTHLQPKQCIFEHIYFALPNSVVFGRSVYESRRKFGEILATESPVDCDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRMIKEAGAKEVHMRISSPPIIGSCYYGVDTPSSEELISNRMSVEEIKDFIGSDSLAFLPIDSLKRVLSDDSPNYCYACFSGKYPVEPREIKVKRVGDFVDDGLSGSPEFIDGGWVHANRTPKEEVGSV* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01849 583 CDD GPATase_N 98 348 IPR035584 -
Pte3g01849 583 MobiDBLite consensus disorder prediction 1 20 - -
Pte3g01849 583 SUPERFAMILY PRTase-like 333 544 IPR029057 -
Pte3g01849 583 CDD PRTases_typeI 360 470 IPR000836 -
Pte3g01849 583 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 98 317 IPR017932 -
Pte3g01849 583 Gene3D - 357 521 IPR029057 -
Pte3g01849 583 NCBIfam amidophosphoribosyltransferase 98 539 IPR005854 GO:0004044|GO:0009113
Pte3g01849 583 Hamap Amidophosphoribosyltransferase [purF]. 97 538 IPR005854 GO:0004044|GO:0009113
Pte3g01849 583 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 98 539 IPR029055 -
Pte3g01849 583 Pfam Phosphoribosyl transferase domain 357 467 IPR000836 -
Pte3g01849 583 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 96 545 - -
Pte3g01849 583 Pfam Glutamine amidotransferase domain 178 295 IPR017932 -
Pte3g01849 583 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 98 321 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01849 Pte-Chr3 29376796 29379123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01849 81 570 PRT Gene Family AT2G16570 83.501 0.0 852
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01849 K00764 - qsu:111995724 946.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01849 3 29376796 29379123 Pte3g01849 3 29376796 29379123 RCT