Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01844 ATGGCGATTAAGAAATCAAGCAAACTTACACAGGCTGCAGTGCTCAAGCAAATTCTTAAAAGATGTTCAAGCCTTGGAAAGAAGCATGGATATGACGATGATGGCCTTCCTTTGGATGTGCCAAAGGGCCATTTTGCCGTCTATGTGGGGGAAAACAGAAGTAGGTACATTGTGCCTATCTCATTTTTGACTCATCCCGAGTTTCAATCCCTCCTTCAACGAGCTGAGGAAGAATTTGGCTTTGATCACGACATGGGCCTCACCATTCCTTGTGAAGAAGTCGTTTTCCGCTCTCTAACATCAATGCTCCGATAA 315 0.4444 MAIKKSSKLTQAAVLKQILKRCSSLGKKHGYDDDGLPLDVPKGHFAVYVGENRSRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01844 104 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 38 102 IPR003676 GO:0009733
Pte3g01844 104 Pfam Auxin responsive protein 32 103 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01844 Pte-Chr3 29337672 29338647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01844 37 99 Calmodulin-binding Proteins AT3G43120 57.143 1.76e-21 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01844 K14488 - pop:7477848 203.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01844 3 29337672 29338647 Pte3g01844 3 29337672 29338647 RCT