Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01843 ATGGCAATCAGCTTGGTTGGGATCATGCATGCTAAGCAAATCATCCGTCGTTCTCTTTTAAAGGGTATAGAAGCAGCCTTAGGATCATCTTATGTGCCGAAAGGACACTTTGCTGTCTATGTTGGAGAGAATCAAAAGAAGAGATTTGTGCTGCCAATTTCGTACCTGAATGAGCCTGTCTTTCAAGAACTGTTGAGTAAGGCCGAGGAAGAGTTTGGGTATGATCATCCGATGGGTGGTCTCACAATCCCTTATCAAGGATGCAACTTCAGACATAATTGCCACCTCAGGACTCGGGAAGTAAAAGCGGCATGA 315 0.4476 MAISLVGIMHAKQIIRRSLLKGIEAALGSSYVPKGHFAVYVGENQKKRFVLPISYLNEPVFQELLSKAEEEFGYDHPMGGLTIPYQGCNFRHNCHLRTREVKAA* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01843 104 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 10 88 IPR003676 GO:0009733
Pte3g01843 104 Pfam Auxin responsive protein 28 92 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01843 Pte-Chr3 29322896 29323667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01843 32 92 Calmodulin-binding Proteins AT5G20810 52.459 6.88e-14 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01843 K14488 - qsu:112004178 127.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01843 3 29322896 29323667 Pte3g01843 3 29322896 29323667 RCT