Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01833 ATGAAGCAGCTCATCTATAACATCAAGAAGGAAATCTCCGATGATGGTCAGAAAGTTAAAAGTGTGAAACGGAAGTGGTCTACTTTTGAGCAGTCCTGTGACGCTTTCGATAGCGAGCCTTCTGTCACAGAGCTTGCAGAAAAGCTTCGAGCAAACCTTGCTGCACAATTCCCAAGCTTTTTCAAGTGTATGCACCCATCAAATGTTTGTACTGGCTTTTATCTGAAGCTTCCAAAGATATTCTGTGACCTACATTTGCCCAGACATGATGAAACAATGATCTTGATTGATGAAAGTGGAAAAGAATATGAGATTAAATTTCTTGCAGAACGAAAATCACTCTCAGGTGGATGGAGAAGATTCTCTTGTCTAAAAAAATTATTTGTAGGTGATGCTTTAGTGTTCCATCTGATCAAACCTTCCAAGTTCATGGTCTACATTGTAAGAGCAAATAGTAGAGCTGAAGTGGATGGGGCTCTTAGTCTTTTGAGTTTAAGGGGCATTGCCAACAAACCTACTTTGGGTAAGGGGTGA 534 0.4026 MKQLIYNIKKEISDDGQKVKSVKRKWSTFEQSCDAFDSEPSVTELAEKLRANLAAQFPSFFKCMHPSNVCTGFYLKLPKIFCDLHLPRHDETMILIDESGKEYEIKFLAERKSLSGGWRRFSCLKKLFVGDALVFHLIKPSKFMVYIVRANSRAEVDGALSLLSLRGIANKPTLGKG* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01833 177 Pfam B3 DNA binding domain 60 150 IPR003340 GO:0003677
Pte3g01833 177 SMART B3_2 60 151 IPR003340 GO:0003677
Pte3g01833 177 CDD B3_DNA 58 149 IPR003340 GO:0003677
Pte3g01833 177 Gene3D - 41 153 IPR015300 -
Pte3g01833 177 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 38 153 IPR044837 -
Pte3g01833 177 ProSiteProfiles B3 DNA-binding domain profile. 60 151 IPR003340 GO:0003677
Pte3g01833 177 SUPERFAMILY DNA-binding pseudobarrel domain 56 151 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01833 Pte-Chr3 29156456 29160094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01833 46 157 B3 DNA Binding Superfamily AT3G19184 47.321 2.27e-31 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Pte3g01833 B3 9.8e-14 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01833 - - dzi:111308279 172.94