Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01825 ATGTCGCCTTCTTCCTCGTTCAAGAAATCTCGACTCAACGCAATGAATCCGACAAGAAAATCTTTCTCCCAGCGGTTTGCAACGACTTCAAGCCGTCTGAGTCATGAGGAAGAACTCTCTATCATGGTTTCTACACTCACCCAAGTTGTTTCTGGTTCTACTTTTACTGCGGCTTCTGCAACTTCTGGATTTGCTACAGAGTTTTTGGTTCCACAGACACCTTCTTCTACTTCAAGTGACAGCTTTCACTGCATGGAGGGAATAGCGACTCCCGAGGCGATTCAAACCTGTCGGGAATGCAACTATGAAGGCTGTCTAGGGTGTGCATTCTTCACGGAAGAAACGAACAAGGGTCCTAATGGTACCTCTGGGAGTGATAAAATCAAAAGGTCCAAGAAGAAATACAGGGGAGTGAGACAGAGGCCATGGGGGAAATGGGCTGCTGAGATACGAGATCCTATACGTGCTACACGAGTTTGGCTTGGGACGTTCCACACTGCCGAGGAAGCAGCAAGAGCGTATGATAAGAAAGCGATCGAATTTCGAGGGCCAAGAGCGAAACTGAATTTTCCATTTCCTGATAATGAAACATTGAGCTCATGTGAGACAGAGGCAGAGCAGCCAAAACAAGAAGAGCCGGTAGTGCCAACTCAGCAAGTTGCTTATCAGAATAGTCAAATAAACGACAACGACTTCTCAAATGGAACAGGGATGGGTAATGCAGTCAATGAGAATAATGCAGAGATTGGCTTCTGGGATTGGATGAAAGTGGAAAGTGAGTTTCAGCAGATGTTGATGATGGATTTTGCAGACAATTCTTCAGATTCTACCTATGGGTATAATGCTCTCAGTTACTGA 858 0.4545 MSPSSSFKKSRLNAMNPTRKSFSQRFATTSSRLSHEEELSIMVSTLTQVVSGSTFTAASATSGFATEFLVPQTPSSTSSDSFHCMEGIATPEAIQTCRECNYEGCLGCAFFTEETNKGPNGTSGSDKIKRSKKKYRGVRQRPWGKWAAEIRDPIRATRVWLGTFHTAEEAARAYDKKAIEFRGPRAKLNFPFPDNETLSSCETEAEQPKQEEPVVPTQQVAYQNSQINDNDFSNGTGMGNAVNENNAEIGFWDWMKVESEFQQMLMMDFADNSSDSTYGYNALSY* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01825 285 Pfam AP2 domain 134 183 IPR001471 GO:0003700|GO:0006355
Pte3g01825 285 ProSiteProfiles AP2/ERF domain profile. 134 191 IPR001471 GO:0003700|GO:0006355
Pte3g01825 285 FunFam Ethylene-responsive transcription factor 2 133 192 - -
Pte3g01825 285 PRINTS Ethylene responsive element binding protein signature 135 146 IPR001471 GO:0003700|GO:0006355
Pte3g01825 285 PRINTS Ethylene responsive element binding protein signature 157 173 IPR001471 GO:0003700|GO:0006355
Pte3g01825 285 PANTHER DNA-BINDING DOMAIN 81 223 IPR044808 GO:0003700|GO:0009873
Pte3g01825 285 MobiDBLite consensus disorder prediction 1 29 - -
Pte3g01825 285 Gene3D AP2/ERF domain 133 192 IPR036955 GO:0003700|GO:0006355
Pte3g01825 285 CDD AP2 133 191 IPR001471 GO:0003700|GO:0006355
Pte3g01825 285 SMART rav1_2 134 197 IPR001471 GO:0003700|GO:0006355
Pte3g01825 285 SUPERFAMILY DNA-binding domain 134 192 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01825 Pte-Chr3 29077974 29079069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01825 32 194 AP2-EREBP Transcription Factor Family AT4G34410 47.619 6.91e-34 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte3g01825 AP2 3e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01825 - - qsa:O6P43_011716 235.728