Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01814 ATGCCTGGGAGTTTAGAGCCGTTAGATTTGGGAGTTCAGATTCCATACCACTTCAGGTGTCCGATCTCTCTAGAACTGATGCGTGACCCGGTTACTGTCTCTACCGGCCAGACCTACGACCGGTCCAGCATCGAGTCATGGGTCGCAACCGGCAACACCACCTGCCCTGTCACTCGGGTGCCTCTAACCGATTTCACTCTCATTCCAAATCATACTCTCCGCCGCCTCATTCAAGACTGGTGTGTTGCCAACCGGTCTTTCGGAGTAGAACGTATTCCCACACCGAAACAACCGGCTGACCCGGCTTGGGTCCGGTCTTTGCTCAACCAAGCGTCTTCTCAGGCGAATACGGATAGGTCTCGCATGGCTGCAATCCGTCGACTTAGAGGGCTCGCTCGTGACTCGGAGAAAAATCACTCTGTCATTTCCTCGCACAACGGACGTGAAATCCTTCTGGAAATCGTTTTTTCCAAAACAGATTCAGAACCAGCATCCGAGTTGAGCCGCGAGTCACTCGCTATTCTTGTTATGTTCTCACTCACTGAATCGGAATGCACTTCCGTTGCTTCGGACCCTGATAAAGTGGTTTATCTCTCGCGTCTTCTGTTTCATCCATCCGTTCATGTCCGAGTTAACTCTGCTGCGCTAATTGAAATGGTGGTGGCTGGAACCGGAGTTCCAGAACTCCGAGCTCAAATCAGCAATGTCGATGAAATTTATGAAGGGGTAATAGATATTTTAAAGAATCCCATATCTTATCCTCGAGCATTGAAGATTGGAATCAGGGCGCTGTTCGCTTTGTGCCTGGTGAAGCAGACCAGGCACAAAGCTGTCGCAGCCGGTGCTGCTCACACGTTGATCGAACGGTTGCTAGATTTTGAAAAATGCGACGTGGAGAGAGCGTTGGCAACGATAGAATTGCTGTGTAGAATTCCGGCAGGGTGTGCTGAATTCGCTACACATGCTCTCACAGTTCCTCTGCTGGTGAAGACGATACTGAAGATTTCGGATCGCGCAACGGAGTATGCTGCCGGAGCACTTGTGTCGTTGTGTTCAGCTTCGGAGCCGAGCCAGAGAGAGGCGGTGGCTGCTGGTGTGCTGACACATTTGTTGTTGTTAGTACAGAGTGATTGTACGGAACGAGCGAAGAGGAAAGCACAGTTGTTACTGAAGCTTCTTCGGGATTCGTGGCCTGAAGATTCTATCGGAAATTCCAACGATTTTGTGTGCAGTGAGGCTGTCATGCCCTATTGA 1254 0.5048 MPGSLEPLDLGVQIPYHFRCPISLELMRDPVTVSTGQTYDRSSIESWVATGNTTCPVTRVPLTDFTLIPNHTLRRLIQDWCVANRSFGVERIPTPKQPADPAWVRSLLNQASSQANTDRSRMAAIRRLRGLARDSEKNHSVISSHNGREILLEIVFSKTDSEPASELSRESLAILVMFSLTESECTSVASDPDKVVYLSRLLFHPSVHVRVNSAALIEMVVAGTGVPELRAQISNVDEIYEGVIDILKNPISYPRALKIGIRALFALCLVKQTRHKAVAAGAAHTLIERLLDFEKCDVERALATIELLCRIPAGCAEFATHALTVPLLVKTILKISDRATEYAAGALVSLCSASEPSQREAVAAGVLTHLLLLVQSDCTERAKRKAQLLLKLLRDSWPEDSIGNSNDFVCSEAVMPY* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01814 417 PANTHER WDSAM1 PROTEIN 12 399 IPR045185 GO:0061630
Pte3g01814 417 SMART Ubox_2 17 80 IPR003613 GO:0004842|GO:0016567
Pte3g01814 417 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 13 87 IPR013083 -
Pte3g01814 417 SUPERFAMILY ARM repeat 106 394 IPR016024 -
Pte3g01814 417 Pfam U-box domain 14 85 IPR003613 GO:0004842|GO:0016567
Pte3g01814 417 SUPERFAMILY RING/U-box 12 88 - -
Pte3g01814 417 CDD RING-Ubox_PUB 15 67 IPR045210 -
Pte3g01814 417 FunFam RING-type E3 ubiquitin transferase 8 90 - -
Pte3g01814 417 ProSiteProfiles U-box domain profile. 13 87 IPR003613 GO:0004842|GO:0016567
Pte3g01814 417 Gene3D - 94 411 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01814 Pte-Chr3 28516769 28518493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01814 1 418 U-box Gene Family AT1G49780 69.267 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01814 - - mnt:21410125 666.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01814 3 28516769 28518493 Pte3g01814 3 28516769 28518493 RCT