Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01812 ATGCAGGGTGAGAGAAGGACCATCGGGCCCTTCCCCGAGGTTTTTGATGTTAGACAAGGGTCAACTTCCAGAACTGCTGATATAGCTCCACAAACTTCCTTGAATGACATACTGAATCCGGCAGACAGCCAGTATTCGGATTTTATGACATCTTTTAATGGACCAACATGTGACAATAATCTAGATGCTCAGAGGTACCGTGGCTTGGATTCTGGTGAATCTAGTTCTAGGTTGAATTTGCAAAACCAGGTCTGTAATGATAGAGCAAAAGTGGAACATCGTTGGCCTTCTCCATTTGCTCCTCGTTCTGGAATCAGCCTCAGGCTGGAAGAAAGGGGATATCAGACAAGCAATTTAGCCTTTCCTGGTAGGTCAAACCCACATTTGGATGGAAACCTCTTGAGAAGAGATCCTATGCAAGGTTCTAGTTCCAGTCATATGATCCACAATGTGAATTTGAACGTGGGATATATTGGCAATGGTGATAATTATGTGCAGGGCATGAATGCTGAGAACCACTTTGATACTTGCATGTCTCATGGGGTGGATCTAGAGCATGCATCTTCAACTTTTAATTCATTTGATCATGTTGGACCTTCATCTGAAAATGCTGGGTTTGTGATGGACGAAGATAGCAGTGACTCAAGTTCTTTTGGAAGCTTAGGCTCTTCCTGCAAAAGGAAGGCTCTTGAAGGAAGTTCTGGGCATTCTTTTCTGGGTGGAAGCTCGAGCACTCTTCTTGATACAGAAAACAATGTGTGGAACAATAATAATTTCCCTCGTAATCCAAGTGTTTCTACACCCTCAATGAACTTTCCAGGTCATGATCCTCCTGTATTTCAGAACCCAAGAACTGGAATTGGAATGAGAGGAATGACTTCTGATGCAATCCCTTCAACAACGGTTGCCCGGATCGACAGGTCTTCAAGAAATTTTGGTAAGATGGTTACTTGGAATGACGATGTGCCTCATAATTTGTCATCATCTGGGACTTCTGGAAATTCCCATTTTGGTCCTGCTCACCATATATCCAGAACCATCCCGTCAGCTGATTCGCTGGAATTAAGATTAACAGCGGGTGCAGCAGCCAGTTCTGGCTCTGTTCAGAACCAGTCAAGTGCCACGAATGCAACTATTTTTCGTCCTTCTCTATGTAATGGATCTAATCCAATGGTCGGCAGCTCATCAAATCTTGTTATACCTGATGAAAGAGCAGTTCGTGAAGAATCAAATCGAAGAATATCTCATAGAAACAGTTCTGAGCGCTCTATATTTGTACCTAGAGCTGAAATGAGGAATTCAGGAAATGATCCAGCTGCTTGGAATGTAGCTGCTGGAAACATAAGTAATTCCAGAAGTATACCTTCAGCTGTTCGGGTAGAACCAAGTTCGAACTTCAACCCTTTCCATGCTCCTAACTTTATTCCACACCATAATATTCCACCACATAATCAGCAAAGATTATCAGATCTTACCCCTTGGTCTTTGTTTCCTTCGGGCTCTGACTCTGGAGTTGATATTGATCACTTTAGCACATTCTCTGCTTCTTCTGCTTCCTCCCGAGGTTCAATTCTACCTGGCAGAGCCAATGGTCAAAGCCACCATCAACCATATCCTAGACCATCATTCTCGATGGAGAGACATGGTAATGACTTTCCTATTGCCACTCATTCTTTAAGGGGTTTTGTTTCGGACATTGAAGGTAGGCGTCGTCTGTTATCAGAGATCCGTCAAGCACTAAATGCAATGCGTAGGGTGGAGAGCTTGCAAGCTGAGGATTACATGCTCTTCGATCCTTTCATTTATCATGGTATTGCTGAGATGCATGATAGACACAGAGATATGCGCCTGGATGTTGATAATATGTCTTATGAGGAGTTATTGGCACTGGAGGAGCGTATAGGAGATGTGAGCACTGGATTGAGTGAGGATACTATTATGAAGGGAATGAAACAGAGGAAATATGCATCTCTGTCGACATTGACCTCACCAGATGTAGAACCATGCTGTATCTGTCGGGAGGAGTACGCTGATGGCGAAGATATTGGATCATTGGATTGCAGGCATGACTTTCATACTGACTGTATCAAGCAGTGGCTAATGCAAAAGAATCTTTGCCCTATATGTAAGACGACAGCCTTGAGCAGTGGCTAA 2154 0.4345 MQGERRTIGPFPEVFDVRQGSTSRTADIAPQTSLNDILNPADSQYSDFMTSFNGPTCDNNLDAQRYRGLDSGESSSRLNLQNQVCNDRAKVEHRWPSPFAPRSGISLRLEERGYQTSNLAFPGRSNPHLDGNLLRRDPMQGSSSSHMIHNVNLNVGYIGNGDNYVQGMNAENHFDTCMSHGVDLEHASSTFNSFDHVGPSSENAGFVMDEDSSDSSSFGSLGSSCKRKALEGSSGHSFLGGSSSTLLDTENNVWNNNNFPRNPSVSTPSMNFPGHDPPVFQNPRTGIGMRGMTSDAIPSTTVARIDRSSRNFGKMVTWNDDVPHNLSSSGTSGNSHFGPAHHISRTIPSADSLELRLTAGAAASSGSVQNQSSATNATIFRPSLCNGSNPMVGSSSNLVIPDERAVREESNRRISHRNSSERSIFVPRAEMRNSGNDPAAWNVAAGNISNSRSIPSAVRVEPSSNFNPFHAPNFIPHHNIPPHNQQRLSDLTPWSLFPSGSDSGVDIDHFSTFSASSASSRGSILPGRANGQSHHQPYPRPSFSMERHGNDFPIATHSLRGFVSDIEGRRRLLSEIRQALNAMRRVESLQAEDYMLFDPFIYHGIAEMHDRHRDMRLDVDNMSYEELLALEERIGDVSTGLSEDTIMKGMKQRKYASLSTLTSPDVEPCCICREEYADGEDIGSLDCRHDFHTDCIKQWLMQKNLCPICKTTALSSG* 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01812 717 MobiDBLite consensus disorder prediction 254 275 - -
Pte3g01812 717 MobiDBLite consensus disorder prediction 517 539 - -
Pte3g01812 717 FunFam E3 ubiquitin-protein ligase MBR2 636 714 - -
Pte3g01812 717 SMART ring_2 669 709 IPR001841 -
Pte3g01812 717 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 222 715 IPR045191 GO:0061630
Pte3g01812 717 SUPERFAMILY RING/U-box 668 713 - -
Pte3g01812 717 MobiDBLite consensus disorder prediction 517 547 - -
Pte3g01812 717 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 633 714 IPR013083 -
Pte3g01812 717 ProSiteProfiles Zinc finger RING-type profile. 669 710 IPR001841 -
Pte3g01812 717 MobiDBLite consensus disorder prediction 254 271 - -
Pte3g01812 717 Pfam Ring finger domain 669 710 IPR001841 -
Pte3g01812 717 Coils Coil 569 589 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01812 Pte-Chr3 28505179 28510436 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01812 1 716 C3H Transcription Factor Family AT2G15530 35.239 5.16e-96 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01812 - - zju:125424136 603.594