Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01795 ATGAGTAAAGTTCGCCTAAAAAGAGTAAACCCAGACCAAGAAGTGAATTCTAGTACTTGTGTGACTAAGATGGCCACCTCCAGCGTAGGTAGCAAAGAAAGCCCATTCCGAACTCCACCTTCGCTATCTTTTTGCTCTCGCAAGCTTGTCAATGATACCAAGTGCAGTGAAGCATCCAACCACCTTTGTTTTAAACAGCACAAAAAGGCTTTGCTTGAACTGTTGGACCAGGTTGAGGATGTTATTTCTGTTGAAAACACTGCAATCTGTGACAATGGAGCACATTGCTCCAAAGTTCTAATGAGAAACATGCCTGAGGCACCTGTAAAAGCCTTTCATTCAGAAACCTCAGAAACAATCTCTCTTGAAAAGATGGATGAATCAATGAGAAATTTCTTAGTGTTGGAGGTATCTGAGAAGTTTAAGGATGATGATTCAGCAGATCCGCAGCGTCCTCACAAGGTTCTGCGCCTCCTAAACGAGCTAACTGGCGAGGAGCATGCTGCAAACCTATGGGATGAGTGGTTTTATTGTGTGATTGCACCTGGAGATAGCGTAAATGTTATCGGTCAATTTAATGAACTTGGAAAGTGTGATGTTGATCATAACAATAATTTTGTTATTGTTCATCCAGAGATCATGGTCTCTGGGACGAGGGTTGCTGCTAGTTTTAGTTGTCCAAGGCGAACAGTGTTAGATGAGAGGATAAAATTAAGGGATCATTCTGTTGCAGCTTTGATTGGAACAATGTTACACCAGATTTTTCAGGCTGGTCTAATGAAGGAGTTCCCCACAATTAACTTCTTGGAGGAATATGCACATATCGTGCTCCAAAGAAACATTGAGAGCTTGTATGCATGTGGAGTGAATGAAAATGATATACACAAAACTTTGGTTGAGGCTATCCCAAAAATATTAGACTGGATCATGCGGTTCCAGAAAACACAGGAAAATCAAGGTACTTTTGTTGATTTTGGATTTGAGGATGGGCCTAAGAAACTTGGTATCTATGAGGTTATTGATATTGAAGAAATGGCATGGGCACCAAAATATGGCTTGAAAGGTATGATTGATGCTTCTGTCAGAGTGAAGGTTCATTCCAAACAAAGTGAACTTGACGAGTTGATCATGCCATTGGAATTCAAAACTGGAAAATCACCAAGTGGCCAGTCATCTGCAGAACACTGTGCCCAAGTCATCTTGTATACTCTCCTTATGTCTGAAAGGGCATCTTGGTCCAAAGATCGGACTTAA 1254 0.4115 MSKVRLKRVNPDQEVNSSTCVTKMATSSVGSKESPFRTPPSLSFCSRKLVNDTKCSEASNHLCFKQHKKALLELLDQVEDVISVENTAICDNGAHCSKVLMRNMPEAPVKAFHSETSETISLEKMDESMRNFLVLEVSEKFKDDDSADPQRPHKVLRLLNELTGEEHAANLWDEWFYCVIAPGDSVNVIGQFNELGKCDVDHNNNFVIVHPEIMVSGTRVAASFSCPRRTVLDERIKLRDHSVAALIGTMLHQIFQAGLMKEFPTINFLEEYAHIVLQRNIESLYACGVNENDIHKTLVEAIPKILDWIMRFQKTQENQGTFVDFGFEDGPKKLGIYEVIDIEEMAWAPKYGLKGMIDASVRVKVHSKQSELDELIMPLEFKTGKSPSGQSSAEHCAQVILYTLLMSERASWSKDRT* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01795 417 Gene3D - 290 413 IPR011604 -
Pte3g01795 417 PANTHER CRISPR-ASSOCIATED EXONUCLEASE CAS4 200 409 - -
Pte3g01795 417 Pfam DNA replication factor Dna2 163 363 IPR014808 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01795 Pte-Chr3 26558605 26570987 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01795 6 409 Core DNA Replication Machinery Family AT1G08840 55.072 1.58e-141 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01795 K10742 - qsa:O6P43_017137 527.324