Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01787 ATGAAGTGCTTTCCTTATTTCAAAGAGAGATCCAGAAGCAGGACACAGAGATCAGCACCTGAGCTGAAAAAGCAAGAGGAATCATCAAATAATTCAGGATGTGACAGAGTAGCAAAATCGTTAACTTTGTCAACCTCACCTCGGGGTATTCCAGAGTTGTATGAAGAGAAGGCTCATAATTTGAGAGTTTTCTCTTTCTCAGAGCTTAGGCATGCCACGAATGATTTCAGTGCACTTCTGAAAATCGGAGAAGGTGGATTTGGTGGCGTATACAAGGGCTACATCAAGCCTATTGATGGAAATGGTGGAAAAATCCTTGTTGCTATCAAAAGGTTAAACAGAGATGGATTGCAGGGACACAAGGAATGGGTGGCTGAAGTACAATTTCTTGGAGTTGTGGAGCACCCAAATCTTGTCAAGCTCATTGGGTATTGCGCTGTTGATGATGAAAGAGGGATACAAAGACTGCTTGTATATGAATACATGCCAAACAAGAGCTTGGAGCATCATCTTTTCAACAGAGCTTATGGACCTCTCTCTTGGGAAACCAGGCTAGAGATAATGCTTGGTGCAGCTCAAGGATTAGCATATTTGCACGAAGGGTTGGAAGTCCAGATAATATATCGAGATTTCAAATCATCAAATGTCTTACTGGATGAGAATTTCAAGCCAAAGCTTTCTGACTTTGGACTTGCAAGGGAGGGACCAGTAGCTGGACAAACTCATGTTTCTACTGCAGTAAGTTTCTGA 750 0.4213 MKCFPYFKERSRSRTQRSAPELKKQEESSNNSGCDRVAKSLTLSTSPRGIPELYEEKAHNLRVFSFSELRHATNDFSALLKIGEGGFGGVYKGYIKPIDGNGGKILVAIKRLNRDGLQGHKEWVAEVQFLGVVEHPNLVKLIGYCAVDDERGIQRLLVYEYMPNKSLEHHLFNRAYGPLSWETRLEIMLGAAQGLAYLHEGLEVQIIYRDFKSSNVLLDENFKPKLSDFGLAREGPVAGQTHVSTAVSF* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01787 249 Pfam Protein tyrosine and serine/threonine kinase 81 235 IPR001245 GO:0004672|GO:0006468
Pte3g01787 249 Gene3D Phosphorylase Kinase; domain 1 50 161 - -
Pte3g01787 249 FunFam Serine/threonine-protein kinase BIK1 44 161 - -
Pte3g01787 249 FunFam Os07g0541700 protein 162 247 - -
Pte3g01787 249 Gene3D Transferase(Phosphotransferase) domain 1 162 248 - -
Pte3g01787 249 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Pte3g01787 249 PANTHER OS01G0588500 PROTEIN-RELATED 26 247 - -
Pte3g01787 249 SUPERFAMILY Protein kinase-like (PK-like) 58 242 IPR011009 -
Pte3g01787 249 ProSiteProfiles Protein kinase domain profile. 76 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g01787 249 MobiDBLite consensus disorder prediction 1 30 - -
Pte3g01787 249 ProSitePatterns Protein kinases ATP-binding region signature. 82 110 IPR017441 GO:0005524
Pte3g01787 249 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01787 Pte-Chr3 25850438 25852081 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01787 62 247 Glycoside Hydrolase AT3G07070 51.596 1.10e-55 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pte3g01787 PK_Tyr_Ser-Thr 1e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01787 - - zju:107431452 394.045