Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01779 ATGAAGTGCTTTCCTTATTTCAAAGAGAGATCCAGAAGCAGGACACAGAGATCAGCACCTGAGCTGAAAAAGCAAGAGGAATCATCAAATAATTCAGGATGTGACAGAGTAGCAAAATCGTTAACTTTGTCAACCTCACCTCGGGGTATTCCAGAGTTGTATGAAGAGAAGGCTCATAATTTGAGAGTTTTCTCTTTCTCAGAGCTTAGGCATGCCACGAATGATTTCAGTGCACTTCTGAAAATCGGAGAAGGTGGATTTGGTGGCGTATACAAGGGCTACATCAAGCCTATTGATGGAAATGGTGGAAAAATCCTTGTTGCTATCAAAAGGTTAAACAGAGATGGATTGCAGGGACACAAGGAATGGGTGGCTGAAGTACAATTTCTTGGAGTTGTGGAGCACCCAAATCTTGTCAAGCTCATTGGGTATTGCGCTGTTGATGATGAAAGAGGGATACAAAGACTGCTTGTATATGAATACATGCCAAACAAGAGCTTGGAGCATCATCTTTTCAACAGAGCTTATGGACCTCTCTCTTGGGAAACCAGGCTAGAGATAATGCTTGGTGCAGCTCAAGGATTAGCATATTTGCACGAAGGGTTGGAAGTCCAGGTTCTACTCTAG 627 0.429 MKCFPYFKERSRSRTQRSAPELKKQEESSNNSGCDRVAKSLTLSTSPRGIPELYEEKAHNLRVFSFSELRHATNDFSALLKIGEGGFGGVYKGYIKPIDGNGGKILVAIKRLNRDGLQGHKEWVAEVQFLGVVEHPNLVKLIGYCAVDDERGIQRLLVYEYMPNKSLEHHLFNRAYGPLSWETRLEIMLGAAQGLAYLHEGLEVQVLL* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01779 208 Gene3D Phosphorylase Kinase; domain 1 50 161 - -
Pte3g01779 208 ProSiteProfiles Protein kinase domain profile. 76 208 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g01779 208 Pfam Protein tyrosine and serine/threonine kinase 81 200 IPR001245 GO:0004672|GO:0006468
Pte3g01779 208 Gene3D Transferase(Phosphotransferase) domain 1 163 206 - -
Pte3g01779 208 SMART tyrkin_6 76 207 IPR020635 GO:0004713|GO:0006468
Pte3g01779 208 SUPERFAMILY Protein kinase-like (PK-like) 58 200 IPR011009 -
Pte3g01779 208 PANTHER OS01G0588500 PROTEIN-RELATED 26 203 - -
Pte3g01779 208 FunFam Serine/threonine-protein kinase BIK1 44 161 - -
Pte3g01779 208 MobiDBLite consensus disorder prediction 1 30 - -
Pte3g01779 208 ProSitePatterns Protein kinases ATP-binding region signature. 82 110 IPR017441 GO:0005524
Pte3g01779 208 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01779 Pte-Chr3 25002100 25003001 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01779 62 207 Glycoside Hydrolase AT3G07070 49.324 3.08e-37 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pte3g01779 PK_Tyr_Ser-Thr 3.7e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01779 - - qsu:112022488 319.701