Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01762 ATGTTGGAAAAGAGAGATGCATTGGATGCTGTCATGAAGGAGGCTGTCGATCTTGAGAACATCCCCATTGATGAGGTGTTTGAAACTCTGGACTGCACGACTGAGGGTCTGACCCATGAAGAAGTTCAGAAGCGGCTAACTATGTTTGGATACAACAAGCTTGAAGAGAAGAAGGAAAGCAAAATATTGAAATTCTTGGGCTTTATGTGGAACCCTCTATCATGGGTCATGGAAGCAGCAGCTATCATGGCAATTGCTCTTGCACATGGAGGGGACAAACCAGGAGACTATCAAGATTTTGCAGGAGTTATAATTTTACTGATCATCAACTCTACCATCAGTTTCATAGAGGAAAACAATGCAGGCAATGCAGCTGCAGCGCTTATGGCTCGTTTGGCTCCGAAAGCTAAGGTACTTCGTGATGGAAAATGGAAAGAAGAAGATGCTGCTGTCTTGGTTCCAGGAGACATCATTAGCATTAAGCTTGGTGACATTATCCCTGCAGATGCTCGTCTCCTTCAGGGTGATCCTCTGAAGATTGATCAGGCATGGGAGTCGCTTCCAGTAACTAAAAACCCTGGTGATGGAGTTTATTCTGGTTCAACTTGCAAGCAAGGTGAGATTGAAGGTTTAGTTATAGCCACTGGAGTACACACCTTCTTTGGGAAGGCTGCTCATCTTGTGGAGAACACAACACATGTTGGACATTTCCAACAGGTTTTGACATCGATCGGGAACTTCTGTATATGCTCCATTGCTTTTGGGATGCTCATAGAAATCATTGTAATATATGGAATCCAAAAGAGAGGATACCGAGTTGGTATCGATAACCTTCTTGTTCTGCTTATTGGTGGAATTCCCATTGCAATGCCAACTGTACTTTCTGTCACAATGGCCATTGGCGCACATCGTCTGGCGCAGCAGGGTGCTATAACAAAAAGAATGACTGCTATAGAAGAAATGGCTGGAATGGATGTGCTATGCAGTGACAAAACAGGCACATTGACCCTAAACAAGCTCACTGTGGACAAGAACTTAATTGAGGTTTTCACCAAGGGTGTCGACAAGGAATCTGTTGTACTTATGGCTGCAAGGGCTTCAAGGTTAGAGAACCAAGATGCCATTGATGGCGCAATTGTTTCAATGTTGTCAGATCCTAAGGAGGCACGTGCTGGGATTCGAGAAGTTCATTTTCTTCCATTCAACCCAACAGATAAAAGAACTGCACTCACTTATCTAGATGGTGATGGTAAAATGCATAGAGTAAGCAAAGGTGCACCGGAGCAGATTCTCAATCTGGCTTATAACAAGTCAGTAATTGCCAATAGAGTGCATGCAATCATCGACAAGTTCGCAGAACGAGGTCTCCGGTCTCTTGCGGTTGCTCGCCAGCAAGTACCTGATGGATCAAAAGATAGTCCTGGAGGACCATGGGAATTTGTTGGCCTTCTTCCTCTATTCGATCCTCCCAGGCATGACAGTGCTGAAACCATTAGAAGGGCTCTCAATCTTGGTGTCAGCGTTAAAATGATTACAGGAGACCAATTGGCAATTGGTAAAGAAACAGGACGGCGTCTAGGAATGGGGAGCAACATGTATCCTTCTTCATCTTTGCTCGGAGAAACTAAGGATGGAAAAGTTCCTGCACTGCCAGTAGATGATCTTATTGAGCAAGCTGATGGCTTTGCTGGTGTCTTCCCTGAGCACAAGTATGAGATAGTGAGCAGGCTGCAAGCAAGAAAACACATATGTGGAATGACTGGTGATGGGGTGAATGATGCACCTGCCTTAAAGAAAGCTGACATTGGTATTGCAGTGGCAGATGCTACCGATGCGGCTCGTAGTGCATCTGATATAGTTTTGACTGAACCTGGGTTGAGTGTCATAATTAGTGCAGTCTTGACAAGTCGTTCCATATTTCAAAGGATGAAAAACTATACGATATATGCCGTGTCCATCACGATACGGATTGTGCTTGGTTTCATGTTGCTCAATGTCTTCTGGAAATTTGATTTCCCTCCTTTCATGGTTCTTGTGATTGCCATCCTTAATGATGGCACAATCATGACAATATCAAAGGATAGGGTCAAGCCATCTCCTATTCCTGACTGTTGGAGACTAAGTGAAATTTTTACAACTGGAGTTGTCCTTGGCGGCTACATGGCACTTATGACTGTCATATTCTTCTGGGCAGCTTATGAAACAAGCTTCTTTCCAACATATTTTAATGTGAGGGACTTCAATCGGAAAATTTTGGACATGTCAGATAAAACTACAGCTGATGAACTGAATGAGAAGATGGCTTCCGCTGTGTATCTTCAAGTTAGTACAATAAGTCAGGCCCTAATTTTTGTTACACGCTCAAGAAGCTGGTCTTTCATGGAGCGACCTGGCCTTTTGCTTGTCACTGCCTTCATCCTTGCTCAGCTGATTGCAACTGTCATTTCTGCGACTTTAACTTGGAAAATGGCTGGAATCAGAAGCATTGGTTGGGGCTGGACAGGGGTCATCTGGTTATTCAACACCATAACATATTTGCTGCTGGATCCTATAAAATTTTGCGTTCGTTATGCATTAAGTGGAAGGGCTTGGAATCTTGTGGTAGACCAAAGAACTGCATTCACTAACCAGAAAGACTTCGGTAAAGAAGCTCGTTCAGCTGCATGGGCAGCTGAGCAGAGAAACTTACACGGTCTCCCATCTGAGCCTAAAAAACTAAGTGACAAAAGTGCTTACAAGGACGTATCTATAATAGCTGAAGAAGCCAAACGACGTGCTGAAATTGCAAGGATGAGAGAGCTCCACACTTTAAAGGGCAAGGTTGAAACGTTTGCCAAGCTACGTGGCCTTGATATCGATGCCATGAACCAGCACTACACTGTCTAA 2886 0.4401 MLEKRDALDAVMKEAVDLENIPIDEVFETLDCTTEGLTHEEVQKRLTMFGYNKLEEKKESKILKFLGFMWNPLSWVMEAAAIMAIALAHGGDKPGDYQDFAGVIILLIINSTISFIEENNAGNAAAALMARLAPKAKVLRDGKWKEEDAAVLVPGDIISIKLGDIIPADARLLQGDPLKIDQAWESLPVTKNPGDGVYSGSTCKQGEIEGLVIATGVHTFFGKAAHLVENTTHVGHFQQVLTSIGNFCICSIAFGMLIEIIVIYGIQKRGYRVGIDNLLVLLIGGIPIAMPTVLSVTMAIGAHRLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDKESVVLMAARASRLENQDAIDGAIVSMLSDPKEARAGIREVHFLPFNPTDKRTALTYLDGDGKMHRVSKGAPEQILNLAYNKSVIANRVHAIIDKFAERGLRSLAVARQQVPDGSKDSPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVSVKMITGDQLAIGKETGRRLGMGSNMYPSSSLLGETKDGKVPALPVDDLIEQADGFAGVFPEHKYEIVSRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRSIFQRMKNYTIYAVSITIRIVLGFMLLNVFWKFDFPPFMVLVIAILNDGTIMTISKDRVKPSPIPDCWRLSEIFTTGVVLGGYMALMTVIFFWAAYETSFFPTYFNVRDFNRKILDMSDKTTADELNEKMASAVYLQVSTISQALIFVTRSRSWSFMERPGLLLVTAFILAQLIATVISATLTWKMAGIRSIGWGWTGVIWLFNTITYLLLDPIKFCVRYALSGRAWNLVVDQRTAFTNQKDFGKEARSAAWAAEQRNLHGLPSEPKKLSDKSAYKDVSIIAEEAKRRAEIARMRELHTLKGKVETFAKLRGLDIDAMNQHYTV* 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01762 961 Gene3D - 340 487 IPR023299 GO:0000166
Pte3g01762 961 FunFam Plasma membrane ATPase 340 487 - -
Pte3g01762 961 PANTHER CALCIUM-TRANSPORTING ATPASE 19 894 - -
Pte3g01762 961 Pfam haloacid dehalogenase-like hydrolase 324 601 - -
Pte3g01762 961 Pfam Cation transporter/ATPase, N-terminus 20 83 IPR004014 -
Pte3g01762 961 CDD P-type_ATPase_H 36 853 IPR006534 GO:0008553|GO:0016020|GO:0120029
Pte3g01762 961 PRINTS H+-transporting ATPase (proton pump) signature 444 462 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte3g01762 961 PRINTS H+-transporting ATPase (proton pump) signature 587 603 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte3g01762 961 PRINTS H+-transporting ATPase (proton pump) signature 559 575 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte3g01762 961 PRINTS H+-transporting ATPase (proton pump) signature 618 643 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte3g01762 961 PRINTS H+-transporting ATPase (proton pump) signature 772 793 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte3g01762 961 NCBIfam plasma-membrane proton-efflux P-type ATPase 36 817 IPR006534 GO:0008553|GO:0016020|GO:0120029
Pte3g01762 961 Gene3D - 910 961 - -
Pte3g01762 961 PRINTS P-type cation-transporting ATPase superfamily signature 610 622 - -
Pte3g01762 961 PRINTS P-type cation-transporting ATPase superfamily signature 504 514 - -
Pte3g01762 961 PRINTS P-type cation-transporting ATPase superfamily signature 328 342 - -
Pte3g01762 961 PRINTS P-type cation-transporting ATPase superfamily signature 587 606 - -
Pte3g01762 961 PRINTS P-type cation-transporting ATPase superfamily signature 482 493 - -
Pte3g01762 961 SFLD p-type atpase 310 638 IPR044492 -
Pte3g01762 961 SMART Cation_ATPase_N_a_2 17 89 IPR004014 -
Pte3g01762 961 SUPERFAMILY HAD-like 324 634 IPR036412 -
Pte3g01762 961 Gene3D - 325 624 IPR023214 -
Pte3g01762 961 Gene3D - 134 215 - -
Pte3g01762 961 SFLD C1.7: P-type atpase like 310 638 - -
Pte3g01762 961 SUPERFAMILY Calcium ATPase, transmembrane domain M 17 859 IPR023298 -
Pte3g01762 961 Pfam E1-E2 ATPase 132 308 - -
Pte3g01762 961 NCBIfam HAD-IC family P-type ATPase 104 347 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte3g01762 961 NCBIfam HAD-IC family P-type ATPase 562 666 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte3g01762 961 Gene3D - 96 827 - -
Pte3g01762 961 FunFam Plasma membrane ATPase 480 635 - -
Pte3g01762 961 FunFam Plasma membrane ATPase 134 215 - -
Pte3g01762 961 SUPERFAMILY Calcium ATPase, transduction domain A 134 228 IPR008250 -
Pte3g01762 961 FunFam ATPase 4 plasma membrane-type 573 827 - -
Pte3g01762 961 ProSitePatterns E1-E2 ATPases phosphorylation site. 330 336 IPR018303 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01762 Pte-Chr3 21483710 21489023 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01762 6 962 Primary Pumps ATPases AT3G60330 78.252 0.0 1539
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01762 K01535 - rcu:8265793 1580.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01762 3 21483710 21489023 Pte3g01762 3 21483710 21489023 RCT