Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01753 ATGAGTCGTAGAGTCAGGAGGAAATTGTGTAAGAGAGGGAAAGATAAGGTGGTTTTGCCTTGTTACCCTGAAGTTCAAGATGAGGATTTGGATGTGGGTAGGAAAGATGTCGTTGATTGGACTCAGTTGCCTGATGATACAGTAATTCAGCTGTTTTCTTGTCTGAATTATCGTGATCGGGCAAGCTTGGCATCAACTTGTAGGACATGGAGTCTTCTTGGTTGTGCTCCATGTTTATGGACTTCTCTTGATCTTCGTGCTCATCGGTGTGATCCAGCAACGGCAGCTTCACTTGCTCCCAAATGTGCTAATCTTCAGAAGCTTAGATTTCGTGGGGCTGAGTCTGCTGATGCAATTATACACCTCCAAGCAAGAAAGTTGCGTGATATAAGTGGTGAGTACTGCAGGAAAATTTGTGATGCATCTCTTTCAATGATTGTTGCTCGACATGAGGCACTTGAGAGTATTCAGCTTGGGCCTGATTTTTGTGAGAGAATCAGCAGTGATGCTATAAAAGCAATAGCTTATTGTTGCCCAAGATTGCGGAGACTTCGTCTCTCAGGAATCAGGGATGTTAACGCTGATGCTATTAATTCTCTAGCTAAACATTGTCCTAGGTTGACTGATATTGGGTTTATAGATTGTTTAAATGTTGATGAGGTGGCATTGGGCAATATGGCGTCAGTTCATTTTATATCTGTTGCTGGGACTTCAGATATGAAATGGGGTGTCATTTCTCAGTCATGGCAAAAGCTGCCATTTTTGATAGGGTTGGATGTGTCAAGAACAGATATTAGTGCAACTGCTGTCTCAAGAATTCTGTCATCCAGTAGCTTGAAGATTTTTTGTGCTCTGAATTGTGCTGCCCTCGAAGAAAATACAAACTTTTCTGCTAGTAAATATAAAAACAAGTTAGTACTAACTATTTCTACTGACATATTCAAAGGAATAGCTTCTCAATTTTTTGGCAATATGAAAAACGGGAAGAATGTGTTTTTGGAATGGAGAAACATGAAAAAAAAGTATAAGGATTTCGACAAGATGATGTCTTGGCTTGAATGGATCTTATCTCATACGCTTTTACGTTCTGCTGAGAGCACACTACAAGGTCTGGAGAGTTTCTGGATCAAACAAGGGGGATCTCTCTTGCTTAGTTTAGTGCAGAGCTCAGAAGAGGATGTTCAAGAAAGGGCAGCTACAGGACTTGCAACGTTTGTTGTTATTGATGATGAGAATGCTAGCATAGACTGTAATAGAGCTGAGTCGGTTATGCGAGATGGTGGTATACGCCTGCTGTTAGAATTGGCAAAGTCTTGGCGGGAGGGACTCCAGTCAGAGGCTGCTAAGGCCATAGCAAATTTGTCCGTTAATGCAAATGTTGCCAAAGCTGTTGCGGATGAGGGAGGAATCACTATTCTTGCTGGGTTAGCTAGGTCCACGAACAAGCTGGTAGCTGAAGAGGCTGCTGGAGGACTTTGGAATCTTTCTGTTGGAGAAGAACACAAGAGTGCCATTGCTGATGCTGGTGGTGTAAAAGCTTTAGTTGATCTTATTTTCAAATGGTCCTCTGGAGGTGAAGGAGTTATGGAACGTGCAGCTGGTGCATTGGCTAATTTGGCAGCAGATGACAAGTGTAGCACAGTTGTTGCATTGGCTGGTGGTGTACATGCCTTAGTGATGCTTGCCCGTAATTGTGAATTTGATGGAGTTCAAGAGCAGGCTGCCCGTGCATTAGCTAATTTGGCTGCTCATGGAGATAGCAACAGCAACAATGCTGCAGTAGGGCAAGAGGCTGGTGCTCTTGAAGCACTTGTTCATCTTACTCGTTCTCGATATGAGGGGGTCAGACAAGAAGCTGCTGGAGCGTTGTGGAATTTGTCATTTGATGACAGGAATCGAGAAGCAATTGCTGCAGCTGGTGGAGTTGAGGCCTTGGTAACTCTAGCACAGTCATGCTCTAATGCATCCGCTGGACTTCAAGAGAGGGCTGCAGGTGCTCTGTGGGGTTTATCAGTTTCAGAGGCCAATAGCATTGCTATTGGACGAGAAGGAGGTGTTGTGCCTTTGATTGCTCTGGCACGTTCAGATTCTGAGGATGTTCACGAAACTGCTGCAGGAGCACTCTGGAACCTTGCTTTCAACCCTGTGAATGCCCTTAGGATAGTGGAGGAAGGGGGAGTTCGGGCATTGGTTCATTTATGTTCTTCATCAGTATCAAAAATGGCACGTTTTATGGCCGCCTTGGCATTGGCTTACATGTTTGATGGGAGAATGGATGAAATTGCATTACTAGGCAGCTCATCGGAAAATAATTCCAAAAGTGTTAGCTTGGATGGAGCTAGAAGACTGGCCTTGAACCACATTGAGGCATTTGTTCGCAAGTTCTCGAATCCTCAAGCATTTTCTGTTGCTGCTGCATCATCAGCTCCTGCTGCATTAGCACAAGTAACTGAGGGTGCTCGTATCCAGGAAGCTGGACATCTCAGATGCAGTGGGGATGAAATTGGAAGATTTGTTACCATGCTACGAAACCCATCTACAACACTCAAGGCTTGTGCTGCATTTGCTCTTCTTCAGTTTAGCATTCCTGGAGGAAGGCATGCTGTACACCACGCGGGCCTCATGCAGAATGCAGGAGCATCAAGGGTTCTTCGTGCAGCAGCCGCAGCTGCGTCTGCCCCACTTGAGGCCAAGATCTTGGCCAGAATCGTTCTTCGCAATCTGGAGCATCACCATACTGATCTAACAGTTTCATTTATATTGTGA 2766 0.4476 MSRRVRRKLCKRGKDKVVLPCYPEVQDEDLDVGRKDVVDWTQLPDDTVIQLFSCLNYRDRASLASTCRTWSLLGCAPCLWTSLDLRAHRCDPATAASLAPKCANLQKLRFRGAESADAIIHLQARKLRDISGEYCRKICDASLSMIVARHEALESIQLGPDFCERISSDAIKAIAYCCPRLRRLRLSGIRDVNADAINSLAKHCPRLTDIGFIDCLNVDEVALGNMASVHFISVAGTSDMKWGVISQSWQKLPFLIGLDVSRTDISATAVSRILSSSSLKIFCALNCAALEENTNFSASKYKNKLVLTISTDIFKGIASQFFGNMKNGKNVFLEWRNMKKKYKDFDKMMSWLEWILSHTLLRSAESTLQGLESFWIKQGGSLLLSLVQSSEEDVQERAATGLATFVVIDDENASIDCNRAESVMRDGGIRLLLELAKSWREGLQSEAAKAIANLSVNANVAKAVADEGGITILAGLARSTNKLVAEEAAGGLWNLSVGEEHKSAIADAGGVKALVDLIFKWSSGGEGVMERAAGALANLAADDKCSTVVALAGGVHALVMLARNCEFDGVQEQAARALANLAAHGDSNSNNAAVGQEAGALEALVHLTRSRYEGVRQEAAGALWNLSFDDRNREAIAAAGGVEALVTLAQSCSNASAGLQERAAGALWGLSVSEANSIAIGREGGVVPLIALARSDSEDVHETAAGALWNLAFNPVNALRIVEEGGVRALVHLCSSSVSKMARFMAALALAYMFDGRMDEIALLGSSSENNSKSVSLDGARRLALNHIEAFVRKFSNPQAFSVAAASSAPAALAQVTEGARIQEAGHLRCSGDEIGRFVTMLRNPSTTLKACAAFALLQFSIPGGRHAVHHAGLMQNAGASRVLRAAAAAASAPLEAKILARIVLRNLEHHHTDLTVSFIL* 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01753 921 Gene3D - 381 523 IPR011989 -
Pte3g01753 921 SUPERFAMILY F-box domain 34 93 IPR036047 GO:0005515
Pte3g01753 921 Gene3D - 682 826 IPR011989 -
Pte3g01753 921 SMART arm_5 714 755 IPR000225 GO:0005515
Pte3g01753 921 SMART arm_5 673 713 IPR000225 GO:0005515
Pte3g01753 921 SMART arm_5 629 672 IPR000225 GO:0005515
Pte3g01753 921 SMART arm_5 457 497 IPR000225 GO:0005515
Pte3g01753 921 SMART arm_5 498 541 IPR000225 GO:0005515
Pte3g01753 921 SMART arm_5 588 628 IPR000225 GO:0005515
Pte3g01753 921 SMART arm_5 417 456 IPR000225 GO:0005515
Pte3g01753 921 SMART arm_5 542 583 IPR000225 GO:0005515
Pte3g01753 921 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 599 641 IPR000225 GO:0005515
Pte3g01753 921 Gene3D - 524 588 IPR011989 -
Pte3g01753 921 SUPERFAMILY RNI-like 82 292 - -
Pte3g01753 921 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 684 726 IPR000225 GO:0005515
Pte3g01753 921 Gene3D - 589 681 IPR011989 -
Pte3g01753 921 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 509 554 IPR000225 GO:0005515
Pte3g01753 921 Pfam F-box-like 40 86 IPR001810 GO:0005515
Pte3g01753 921 Pfam Armadillo/beta-catenin-like repeat 675 712 IPR000225 GO:0005515
Pte3g01753 921 Pfam Armadillo/beta-catenin-like repeat 499 541 IPR000225 GO:0005515
Pte3g01753 921 Pfam Armadillo/beta-catenin-like repeat 423 455 IPR000225 GO:0005515
Pte3g01753 921 Pfam Armadillo/beta-catenin-like repeat 591 627 IPR000225 GO:0005515
Pte3g01753 921 Pfam Armadillo/beta-catenin-like repeat 629 671 IPR000225 GO:0005515
Pte3g01753 921 Pfam Armadillo/beta-catenin-like repeat 552 583 IPR000225 GO:0005515
Pte3g01753 921 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 468 510 IPR000225 GO:0005515
Pte3g01753 921 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 427 469 IPR000225 GO:0005515
Pte3g01753 921 SUPERFAMILY ARM repeat 525 784 IPR016024 -
Pte3g01753 921 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 640 685 IPR000225 GO:0005515
Pte3g01753 921 Gene3D Ribonuclease Inhibitor 34 336 IPR032675 -
Pte3g01753 921 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 553 584 IPR000225 GO:0005515
Pte3g01753 921 SMART fbox_2 43 83 IPR001810 GO:0005515
Pte3g01753 921 FunFam Protein ARABIDILLO 2 354 501 - -
Pte3g01753 921 PANTHER PROTEIN ARABIDILLO 1 1 914 - -
Pte3g01753 921 CDD F-box_AtADLO1-like 39 80 - -
Pte3g01753 921 SUPERFAMILY ARM repeat 376 588 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01753 Pte-Chr3 19229539 19249754 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01753 555 757 U-box Gene Family AT2G23140 35.784 1.20e-20 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01753 - - qsa:O6P43_017291 1442.94