Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01738 ATGAAAGCCGAAGCTGCTAAAGCGGATGTCTTCTATTTAATCTCCGGCGCATGGAGGACATCAGTAGAACGTTTCTTTCTCTGGATTGGAGGGCTTCGACCATCACAACTTTTGAATGTTGTCTTGCCACAACTGGAGCCGCCATTAAGTGAGCAGCAACTTGCTAGTGTTAAAAAGCTCCAGCATTCGTCTCTTCAAGCTGAAGACGCTCTCACCCAAGGACTGGACAAACTCCAGCAGACTCTGGCAGAGAGCATAGCCTTCGATGCAATTCTCGCTGAAGACTATGGATCTCAGATAGATTCCTCGGCAGAGAAACTGGAAGCCCTTGAAGGTTTTGTCAACCAGGCAGATCACTTGAGACAGCAATCTCTGCAACACATGTCCCGGATTCTGACAGCCCACCAAGCTGCAAGAGGCCTGCTCGCTTTAGGAGAGTACTTTCACCGTCTCCGTGCCGTCAGTTCTCTTTGGGTCTCTCCTTGTGAAACTGCCGCAGGCGCCGGCGCTGCTACCTTGTAA 522 0.5057 MKAEAAKADVFYLISGAWRTSVERFFLWIGGLRPSQLLNVVLPQLEPPLSEQQLASVKKLQHSSLQAEDALTQGLDKLQQTLAESIAFDAILAEDYGSQIDSSAEKLEALEGFVNQADHLRQQSLQHMSRILTAHQAARGLLALGEYFHRLRAVSSLWVSPCETAAGAGAATL* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01738 173 ProSiteProfiles DOG1 domain profile. 1 161 IPR025422 GO:0006351|GO:0043565
Pte3g01738 173 Pfam Seed dormancy control 1 42 IPR025422 GO:0006351|GO:0043565
Pte3g01738 173 PANTHER TRANSCRIPTION FACTOR TGA9 1 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01738 Pte-Chr3 17258364 17259166 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01738 1 158 Calmodulin-binding Proteins AT1G77920 68.553 3.35e-74 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01738 K14431 - jre:109021341 232.646
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01738 3 17258364 17259166 Pte3g01738 3 17258364 17259166 RCT