Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01705 ATGGCTTACTCTCAATATCGATCACCTTTTGGAGACACCACGTATACCAAGGTATTCGTTGGGGGACTAGCTTGGGAGACCCCCACTGAGAAAATGCGGAAGTATTTTGAGCAATTCGGGGAGATTCTTGAAGCTGTTATTATCAGTAATAAGAGTTCAGGAAAATCCAAAGGATATGGATTTGTAACTTATCGTGAACCCGAATCAGCTAGAAGGGCTTGCGCTGATCCAAACCCTGTAATTGATGGCAGAAGAGCAAATTGTAATATAGCTTCTTTTGGACGGGCTAAACCTTCTCCACCACGAGGAAGAAATGCGGCTCCAAGTAGTAGTTATCATGGAGGCAGTGTGCAGAGTGGACCATCTTACGGTACAGGAACTCAAGCGCCATTTCCGCCGCCACCTTTCATATACTCACCATACAGCTATCAGACGTATTCTCCAGGTTATGGATACCAACAAGCTACTTTGTACACCACGCAGATTCATCAGCCCCAATATCTTACTCAGACATATGGATCATCGTCACCATCATCATCTACCATGATCTCTTCATATTACTACGGGTATACCCTGCAAACTCCGAGTGGAACAATTTCAACGCCTCAAGGGAACAGTCTAATTGGATCCTCGTCCTACATATACCACCCTACAGCCACAGCAGTGGAAGCCTCCTCTCATTCTACTCCACACACACAGTCAACAACGTCTACACACCCCTTTCTCTCATCTAGTACTGCCGATGTAGAGATTCCTCAAAGCACGTGCGACGGAACAGAAGTTCGAGTTGTTACTCAAGAAAGTTCGAGTTATTAA 816 0.4522 MAYSQYRSPFGDTTYTKVFVGGLAWETPTEKMRKYFEQFGEILEAVIISNKSSGKSKGYGFVTYREPESARRACADPNPVIDGRRANCNIASFGRAKPSPPRGRNAAPSSSYHGGSVQSGPSYGTGTQAPFPPPPFIYSPYSYQTYSPGYGYQQATLYTTQIHQPQYLTQTYGSSSPSSSTMISSYYYGYTLQTPSGTISTPQGNSLIGSSSYIYHPTATAVEASSHSTPHTQSTTSTHPFLSSSTADVEIPQSTCDGTEVRVVTQESSSY* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01705 271 MobiDBLite consensus disorder prediction 222 254 - -
Pte3g01705 271 SMART rrm1_1 17 89 IPR000504 GO:0003723
Pte3g01705 271 MobiDBLite consensus disorder prediction 104 126 - -
Pte3g01705 271 Gene3D - 11 96 IPR012677 -
Pte3g01705 271 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 16 98 IPR000504 GO:0003723
Pte3g01705 271 MobiDBLite consensus disorder prediction 92 129 - -
Pte3g01705 271 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 18 75 IPR000504 GO:0003723
Pte3g01705 271 PANTHER BOULE-RELATED 6 236 - -
Pte3g01705 271 SUPERFAMILY RNA-binding domain, RBD 6 120 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01705 Pte-Chr3 16577923 16582643 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01705 12 92 C2H2 Transcription Factor Family AT2G19380 37.037 3.66e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01705 K25006 - tcc:18592140 294.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01705 3 16577923 16582643 Pte3g01705 3 16577923 16582643 RCT