Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01695 ATGTTTGGTTCAATTTATTTCAGAAGGAAACACAGATTTGGCTTCATGGTGGATACTTGTCACCTTTTTCTCTTTTTCTTGTATCCCGTCACTGCAGGGACTAAGCAGACGAGAAATGGTCATGGACCTCATGGTTACAGTGAAGAATTTCAGGCTATGTTAGAAAGACTAGACCAAGAAGATGCCAGTGAAGAAACCAGTGTGATATCGGAGAAGAAACGGCGACTTAATTTGGATCAGGTCAAGGCCTTAGAGAGGAGTTTTGAGTTGGAAAACAAGTTAGAACCAGGACGCAAGTTGAAACTAGCCCAAGAATTAGGCCTGCAACCTCGACAGATTGCTATTTGGTTTCAAAACCGTCGAGCCAGATACAAAACGAAACTATTGGAACGAGATTATGGTATCTTAAAAGCCAATTATGATGCATTGAAGCTCAGTTATGTCAATCTTGAGCATGAAAGAGAAACCCTCTCATTGCAGTTAAGGGAGTTGAAGGAGAAAATGCGTGAAAGGATAGAAGGACGCAAGGACATGGTCAAAGAATTGGTTTCGAATGCAGATAACAATAAGAGCTCTGAGTACAAGAGCGAGAGCCATAATGCGGGTGGTGATAGCGTTAAGGAAGGCACTGGTAAACTTTGGATCAAGGAAGAAGGCAATGTGAATTCTCCTCCTAGCAGTGTGTCGTGTTCAAATTCAGTGATGAACTGCTTTCAGTTATCTGATTCAATAAATGAGCCGGGGAAATCTTATTATCAGTCTCAAGTTGTGAGGATGGAAGAGCAGAGTTTGTTTTGCATAGACGAGTCATGCAGTTTCTTCGCTGTCGATCAAGCTCCCACCCTCCAATGGTCCTTTCAAGGCGAGTGA 870 0.4253 MFGSIYFRRKHRFGFMVDTCHLFLFFLYPVTAGTKQTRNGHGPHGYSEEFQAMLERLDQEDASEETSVISEKKRRLNLDQVKALERSFELENKLEPGRKLKLAQELGLQPRQIAIWFQNRRARYKTKLLERDYGILKANYDALKLSYVNLEHERETLSLQLRELKEKMRERIEGRKDMVKELVSNADNNKSSEYKSESHNAGGDSVKEGTGKLWIKEEGNVNSPPSSVSCSNSVMNCFQLSDSINEPGKSYYQSQVVRMEEQSLFCIDESCSFFAVDQAPTLQWSFQGE* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01695 289 Gene3D - 76 125 - -
Pte3g01695 289 Coils Coil 140 167 - -
Pte3g01695 289 SMART HOX_1 70 131 IPR001356 GO:0003677
Pte3g01695 289 MobiDBLite consensus disorder prediction 184 199 - -
Pte3g01695 289 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 58 216 IPR045224 GO:0003700
Pte3g01695 289 MobiDBLite consensus disorder prediction 184 207 - -
Pte3g01695 289 FunFam homeobox-leucine zipper protein ATHB-6-like 75 121 - -
Pte3g01695 289 Pfam Homeodomain 72 125 IPR001356 GO:0003677
Pte3g01695 289 ProSiteProfiles 'Homeobox' domain profile. 67 127 IPR001356 GO:0003677
Pte3g01695 289 PRINTS Lambda-repressor HTH signature 107 123 IPR000047 GO:0003677
Pte3g01695 289 PRINTS Lambda-repressor HTH signature 98 107 IPR000047 GO:0003677
Pte3g01695 289 Pfam Homeobox associated leucine zipper 127 168 IPR003106 GO:0006355|GO:0043565
Pte3g01695 289 SUPERFAMILY Homeodomain-like 72 138 IPR009057 -
Pte3g01695 289 CDD homeodomain 72 127 IPR001356 GO:0003677
Pte3g01695 289 ProSitePatterns 'Homeobox' domain signature. 102 125 IPR017970 GO:0000981|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01695 Pte-Chr3 16406546 16408589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01695 43 284 Homeobox Transcription Factor Family AT4G40060 40.959 2.91e-49 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pte3g01695 Homeodomain 2.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01695 K09338 - qsa:O6P43_015335 272.707