Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01684 ATGGGGTTTCTTGCAACACTTGCAAGTTCGGCAGTGGATGGCTCTATGTGGCCTTTAATAGAGCTGACAGACAAAAAATCCAAGCAAGCAGTGACTTACCCTCTGGTTATGGAGATTAAGTTCGTGTTTTCTTTCTTCGCCTCTATCTTTTGTATCGTAGGAATGGTCATAAACAATTACTTTCAGGTGATTCCAAGAGAAGCAAAAGATTTTGGGCTTGGTGAAATGGAGTATTACAACGTATTGGTGTGGAGTGGAATCTTATTTCAGATGTCCTTCTTCGGAGTAGTGGGAGTGATATTTTGCTCTTCAACTTTGCTATCCGACATCATGACTGCAGAATGCTTACCACTAACAAAGGTTCTGAAGGTGATGAAGGGAGATTCACGGGTTGTTCTGAAGGAACAAATTCTAGAAGTGCATTTTGGGAGGCAAGGGCTTGAGATAGTTACTTGCATTGGCGGTCTTTATTGTGATGTTATGAGGAAGAAAAGGAAAGGAAGTGAAACTGATGAATTTGCAAAAGTGACGGAGATTTTGACATCGACTCATGGTTCTTTACCGTCCATTCTAAAATGGCACCATTCACTAGACGATTTTGCACGGTTGAAAAAGAGGTGTAAAGAACATGCTGATATTGAAGATGTCGCTTCCCATAAAAGTAGACTTGCTGCTATTGTCACAGCACCACCATGTGGAACCTCATCTTTGCTCACTGGGAGGGGTATTAAAAGGAAGATAGGATGTATAGACATTGCTACTCAAATACGGAGGACAAAAAAGATTGAGGATGATTATATAGCTGGCGACACCATCGGTCAAGGTAAGTTTGGGTCTGTCTGGCTGTGTAGGTCCAAGGTTAGTGGAGCAGAATATGCATGTAAGACACTCCGTAAAGGGGAGGAGACAGTTCATAGGGAAATGGAGATAATGCAACATTTATCTGGACATCCAGGAGTCGTGACACTGCAGGCAGTCTATGAGGAATCAAACTGCTTTCATCTTGTCATGGAATTGTGTTCTGAGGGAAGGCTGATTGATCACATGGTTAAGGAGGGCCATTATTCTGAGCAGTATGCTGCCAATGTATTCGAGGAAGTAATGTCAGTTATCAAGTATTGTCATGATATGGGAGTTGTGCACAGAGATATCAAGCCTGAGAATATTCTTCTTTCAACTTCAGGAAAGATAAAACTTGCTGATTTTGGTCTGGCCATGAGAATTTCTGATGGTCAGCATTTGACTGGTTTAGCTGGAAGCCCAGCATACGTTGCCCCAGAGGTACTGTTAGGTAAATATTCCGAGAAGGTGGATATATGGAGTGCTGGAGTACTTTTGCATGCTCTCTTGGTAGGTGTTCTTCCATTTCAAGGAAATTCCCTCGAAGCTGTATTTGAGGCAATAAAAGATGTGAAACTTGATTTCAAGAGTGGAATCTGGGACTCTATATCAAAACCTGCCCAAGATCTTGTGTCCAGGATGCTGACGAGGGATGTTTCTGCTAGGATTACTGCTGAAGAAGTACTTAGGCATCCATGGATGTTATTCTACACTGAGGATACGTTGAAGACACAGCCTATCCAAACAAAATATCAAGTAGGAGAAACTTCTTGCCAACGTTGTGCGTCACTTGATCCGAAGTTTGAAGGGATGATAGACAGTGATTCTCTGGGCAAGTATCAGAGACCGCTATCTTCTTTCAAGAGTCGGAACTCAGGGAACTGGGATGATCGTGCTCTGATAGATATACTTGCTACTGCAATTTCACGTGTGCGAATATCTGAGCCAAAGACGAGTAGGTTATGTGTGTCCACAGGCCCCATAGAGCACCAGAGTTCTTCTAATTTGAAGCCTAACCACCTCTGTAAAGCATTTTAA 1878 0.4255 MGFLATLASSAVDGSMWPLIELTDKKSKQAVTYPLVMEIKFVFSFFASIFCIVGMVINNYFQVIPREAKDFGLGEMEYYNVLVWSGILFQMSFFGVVGVIFCSSTLLSDIMTAECLPLTKVLKVMKGDSRVVLKEQILEVHFGRQGLEIVTCIGGLYCDVMRKKRKGSETDEFAKVTEILTSTHGSLPSILKWHHSLDDFARLKKRCKEHADIEDVASHKSRLAAIVTAPPCGTSSLLTGRGIKRKIGCIDIATQIRRTKKIEDDYIAGDTIGQGKFGSVWLCRSKVSGAEYACKTLRKGEETVHREMEIMQHLSGHPGVVTLQAVYEESNCFHLVMELCSEGRLIDHMVKEGHYSEQYAANVFEEVMSVIKYCHDMGVVHRDIKPENILLSTSGKIKLADFGLAMRISDGQHLTGLAGSPAYVAPEVLLGKYSEKVDIWSAGVLLHALLVGVLPFQGNSLEAVFEAIKDVKLDFKSGIWDSISKPAQDLVSRMLTRDVSARITAEEVLRHPWMLFYTEDTLKTQPIQTKYQVGETSCQRCASLDPKFEGMIDSDSLGKYQRPLSSFKSRNSGNWDDRALIDILATAISRVRISEPKTSRLCVSTGPIEHQSSSNLKPNHLCKAF* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01684 625 ProSitePatterns Protein kinases ATP-binding region signature. 272 295 IPR017441 GO:0005524
Pte3g01684 625 ProSiteProfiles Protein kinase domain profile. 266 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g01684 625 Pfam Purine nucleobase transmembrane transport 1 125 - -
Pte3g01684 625 SUPERFAMILY Protein kinase-like (PK-like) 255 537 IPR011009 -
Pte3g01684 625 SMART serkin_6 266 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g01684 625 Gene3D Transferase(Phosphotransferase) domain 1 256 559 - -
Pte3g01684 625 PANTHER SERINE/THREONINE-PROTEIN KINASE 253 528 - -
Pte3g01684 625 ProSitePatterns Serine/Threonine protein kinases active-site signature. 379 391 IPR008271 GO:0004672|GO:0006468
Pte3g01684 625 Pfam Protein kinase domain 269 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte3g01684 625 FunFam Maternal embryonic leucine zipper kinase 259 541 - -
Pte3g01684 625 CDD STKc_CAMK 265 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01684 Pte-Chr3 16259591 16268620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01684 266 514 EF-hand Containing Proteins AT1G50700 45.946 1.25e-76 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pte3g01684 Pkinase 5.3e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01684 - - qsa:O6P43_015356 679.093
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01684 3 16259591 16268620 Pte3g01684 3 16259591 16268620 RCT